Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:66760861-67110877

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r38 6 66776222 to 66777130 908 - protein coding gene vomeronasal 1 receptor 38
Vmn1r39 6 66804415 to 66805332 917 - protein coding gene vomeronasal 1 receptor 39
Gm36610 6 66840015 to 66842976 2961 - lncRNA gene predicted gene, 36610
Gm9794 6 66875321 to 66875743 422 - pseudogene predicted pseudogene 9794
Tssr61227 6 66875427 to 66875434 7 - TSS region transcription start site region 61227
Tssr61228 6 66875650 to 66875689 39 - TSS region transcription start site region 61228
Tssr61229 6 66875749 to 66875766 17 - TSS region transcription start site region 61229
4930597O21Rik 6 66894652 to 66896521 1869 - unclassified non-coding RNA gene RIKEN cDNA 4930597O21 gene
Cpgi17505 6 66896073 to 66897462 1389 CpG island CpG island 17505
Gng12 6 66896397 to 67021350 124953 + protein coding gene guanine nucleotide binding protein (G protein), gamma 12
Tssr56866 6 66896410 to 66896421 11 + TSS region transcription start site region 56866
Tssr56867 6 66896429 to 66896440 11 + TSS region transcription start site region 56867
Tssr56868 6 66896444 to 66896479 35 + TSS region transcription start site region 56868
Tssr56869 6 66896480 to 66896492 12 + TSS region transcription start site region 56869
Tssr61230 6 66896515 to 66896516 1 - TSS region transcription start site region 61230
Tssr56870 6 66912642 to 66912646 4 + TSS region transcription start site region 56870
Tssr56871 6 66918511 to 66918523 12 + TSS region transcription start site region 56871
Tssr56872 6 66935861 to 66935877 16 + TSS region transcription start site region 56872
Tssr56873 6 66957026 to 66957031 5 + TSS region transcription start site region 56873
Tssr56874 6 66963306 to 66963309 3 + TSS region transcription start site region 56874
Tssr56875 6 66970504 to 66970534 30 + TSS region transcription start site region 56875
Gm36816 6 66990031 to 67009260 19229 - antisense lncRNA gene predicted gene, 36816
Gm15644 6 67012485 to 67012871 386 + pseudogene predicted gene 15644
Tssr56876 6 67017498 to 67017522 24 + TSS region transcription start site region 56876
Tssr56877 6 67017639 to 67017652 13 + TSS region transcription start site region 56877
Tssr56878 6 67019719 to 67019734 15 + TSS region transcription start site region 56878
Tssr56879 6 67020297 to 67020334 37 + TSS region transcription start site region 56879
Gm29848 6 67022177 to 67022471 294 + pseudogene predicted gene, 29848
Gm25260 6 67027043 to 67027176 133 + snRNA gene predicted gene, 25260
Tssr61231 6 67029824 to 67029838 14 - TSS region transcription start site region 61231
Gadd45a 6 67035096 to 67037407 2311 - protein coding gene growth arrest and DNA-damage-inducible 45 alpha
Tssr61232 6 67035294 to 67035299 5 - TSS region transcription start site region 61232
Tssr1865 6 67035509 to 67035520 11 - TSS region transcription start site region 1865
Tssr61233 6 67035527 to 67035544 17 - TSS region transcription start site region 61233
Cpgi17506 6 67036453 to 67037698 1245 CpG island CpG island 17506
E230016M11Rik 6 67036599 to 67080652 44053 + lncRNA gene RIKEN cDNA E230016M11 gene
Tssr56880 6 67036640 to 67036676 36 + TSS region transcription start site region 56880
Tssr56881 6 67037199 to 67037201 2 + TSS region transcription start site region 56881
Tssr61234 6 67037207 to 67037220 13 - TSS region transcription start site region 61234
Tssr61235 6 67037378 to 67037394 16 - TSS region transcription start site region 61235
Tssr61236 6 67037399 to 67037417 18 - TSS region transcription start site region 61236
Tssr56882 6 67052952 to 67052962 10 + TSS region transcription start site region 56882
Cpgi17507 6 67088955 to 67089144 189 CpG island CpG island 17507
Gm29928 6 67091931 to 67103262 11331 + lncRNA gene predicted gene, 29928