Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:65032407-65217323

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17499 6 65042450 to 65043463 1013 CpG island CpG island 17499
Tssr56812 6 65042575 to 65042662 87 + TSS region transcription start site region 56812
Smarcad1 6 65042589 to 65116061 73472 + protein coding gene SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Tssr56813 6 65042684 to 65042695 11 + TSS region transcription start site region 56813
Tssr1864 6 65042704 to 65042707 3 + TSS region transcription start site region 1864
Tssr56814 6 65042708 to 65042719 11 + TSS region transcription start site region 56814
Tssr56815 6 65042807 to 65042900 93 + TSS region transcription start site region 56815
Tssr56816 6 65042908 to 65042911 3 + TSS region transcription start site region 56816
Tssr56817 6 65106803 to 65106808 5 + TSS region transcription start site region 56817
D6Rck333 6 65115794 to 65115956 162 DNA segment DNA segment, Chr 6, Rockefeller University 333
Hpgds 6 65117293 to 65144908 27615 - protein coding gene hematopoietic prostaglandin D synthase
Gm35906 6 65122407 to 65127323 4916 + lncRNA gene predicted gene, 35906
D6Mit174 6 65125444 to 65125579 135 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 174
Tssr61210 6 65125559 to 65125582 23 - TSS region transcription start site region 61210
Tssr61211 6 65125766 to 65125779 13 - TSS region transcription start site region 61211
Tssr61212 6 65125783 to 65125796 13 - TSS region transcription start site region 61212
Tssr61213 6 65127295 to 65127307 12 - TSS region transcription start site region 61213
Tssr61214 6 65127991 to 65128005 14 - TSS region transcription start site region 61214
Gm17147 6 65128571 to 65129002 431 + pseudogene predicted gene 17147
Tssr61215 6 65130007 to 65130034 27 - TSS region transcription start site region 61215
Tssr61216 6 65130937 to 65130951 14 - TSS region transcription start site region 61216
Tssr61217 6 65131446 to 65131451 5 - TSS region transcription start site region 61217
Tssr56818 6 65143061 to 65143072 11 + TSS region transcription start site region 56818
Tssr61218 6 65144705 to 65144765 60 - TSS region transcription start site region 61218
Tssr61219 6 65144836 to 65144842 6 - TSS region transcription start site region 61219
Tssr61220 6 65144927 to 65144940 13 - TSS region transcription start site region 61220
Tssr61221 6 65144982 to 65144999 17 - TSS region transcription start site region 61221
Tssr56819 6 65145166 to 65145199 33 + TSS region transcription start site region 56819
Cpgi17500 6 65150770 to 65151000 230 CpG island CpG island 17500
Tssr56820 6 65150795 to 65150813 18 + TSS region transcription start site region 56820
Gm44419 6 65150997 to 65151225 228 + pseudogene predicted gene, 44419
Gm3549 6 65169164 to 65169957 793 + pseudogene predicted gene 3549
D6Mit318 6 65211593 to 65211692 99 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 318
Gm44058 6 65213572 to 65214972 1400 - pseudogene predicted gene, 44058