Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:62836052-63676069

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5001 6 62929146 to 62929476 330 + pseudogene predicted gene 5001
Tssr61203 6 63031014 to 63031015 1 - TSS region transcription start site region 61203
Gm19131 6 63046128 to 63046733 605 - pseudogene predicted gene, 19131
Nasp-ps1 6 63160275 to 63160965 690 + pseudogene nuclear autoantigenic sperm protein (histone-binding), pseudogene 1
Gm22212 6 63200041 to 63200146 105 - snRNA gene predicted gene, 22212
Gm46990 6 63245820 to 63249235 3415 + lncRNA gene predicted gene, 46990
9330118I20Rik 6 63248494 to 63257625 9131 - unclassified gene RIKEN cDNA 9330118I20 gene
Tssr56779 6 63255877 to 63255886 9 + TSS region transcription start site region 56779
Tssr56780 6 63255892 to 63255903 11 + TSS region transcription start site region 56780
Cpgi17495 6 63255898 to 63258090 2192 CpG island CpG island 17495
Grid2 6 63255903 to 64704322 1448419 + protein coding gene glutamate receptor, ionotropic, delta 2
Tssr56781 6 63255935 to 63255954 19 + TSS region transcription start site region 56781
Tssr56782 6 63255971 to 63256036 65 + TSS region transcription start site region 56782
Tssr56783 6 63256052 to 63256069 17 + TSS region transcription start site region 56783
Tssr56784 6 63256094 to 63256104 10 + TSS region transcription start site region 56784
Tssr56785 6 63256107 to 63256126 19 + TSS region transcription start site region 56785
Tssr56786 6 63256359 to 63256381 22 + TSS region transcription start site region 56786
Tssr56787 6 63256621 to 63256627 6 + TSS region transcription start site region 56787
Tssr56788 6 63257807 to 63257809 2 + TSS region transcription start site region 56788
Tssr56789 6 63257913 to 63257923 10 + TSS region transcription start site region 56789
Gm44071 6 63324672 to 63328441 3769 - antisense lncRNA gene predicted gene, 44071
Tssr61204 6 63328436 to 63328449 13 - TSS region transcription start site region 61204
Tssr56790 6 63331509 to 63331512 3 + TSS region transcription start site region 56790
Tssr56791 6 63336734 to 63336737 3 + TSS region transcription start site region 56791
D6Rck301 6 63360427 to 63360673 246 DNA segment DNA segment, Chr 6, Rockefeller University 301
D6Mit121 6 63430907 to 63431001 94 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 121
Tssr56792 6 63516212 to 63516239 27 + TSS region transcription start site region 56792
Tssr56793 6 63546758 to 63546760 2 + TSS region transcription start site region 56793
Tssr56794 6 63553122 to 63553129 7 + TSS region transcription start site region 56794
Tssr56795 6 63579836 to 63579839 3 + TSS region transcription start site region 56795
Tssr56796 6 63599418 to 63599423 5 + TSS region transcription start site region 56796
Tssr56797 6 63605435 to 63605440 5 + TSS region transcription start site region 56797
9630021D06Rik 6 63637496 to 63640454 2958 unclassified non-coding RNA gene RIKEN cDNA 9630021D06 gene