Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:62220108-63420633

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccser1 6 61180325 to 62382863 1202538 + protein coding gene coiled-coil serine rich 1
Gm43897 6 62293702 to 62294010 308 - pseudogene predicted gene, 43897
Gm43895 6 62307727 to 62309262 1535 - pseudogene predicted gene, 43895
Gm19237 6 62582103 to 62583184 1081 + pseudogene predicted gene, 19237
Gm44088 6 62630581 to 62630817 236 + pseudogene predicted gene, 44088
Tssr56778 6 62638159 to 62638186 27 + TSS region transcription start site region 56778
D6Mit94 6 62665403 to 62665574 171 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 94
Gm44092 6 62756797 to 62757054 257 + pseudogene predicted gene, 44092
Gm18540 6 62820108 to 62820633 525 + pseudogene predicted gene, 18540
Gm5001 6 62929146 to 62929476 330 + pseudogene predicted gene 5001
Tssr61203 6 63031014 to 63031015 1 - TSS region transcription start site region 61203
Gm19131 6 63046128 to 63046733 605 - pseudogene predicted gene, 19131
Nasp-ps1 6 63160275 to 63160965 690 + pseudogene nuclear autoantigenic sperm protein (histone-binding), pseudogene 1
Gm22212 6 63200041 to 63200146 105 - snRNA gene predicted gene, 22212
Gm46990 6 63245820 to 63249235 3415 + lncRNA gene predicted gene, 46990
9330118I20Rik 6 63248494 to 63257625 9131 - unclassified gene RIKEN cDNA 9330118I20 gene
Tssr56779 6 63255877 to 63255886 9 + TSS region transcription start site region 56779
Tssr56780 6 63255892 to 63255903 11 + TSS region transcription start site region 56780
Cpgi17495 6 63255898 to 63258090 2192 CpG island CpG island 17495
Grid2 6 63255903 to 64704322 1448419 + protein coding gene glutamate receptor, ionotropic, delta 2
Tssr56781 6 63255935 to 63255954 19 + TSS region transcription start site region 56781
Tssr56782 6 63255971 to 63256036 65 + TSS region transcription start site region 56782
Tssr56783 6 63256052 to 63256069 17 + TSS region transcription start site region 56783
Tssr56784 6 63256094 to 63256104 10 + TSS region transcription start site region 56784
Tssr56785 6 63256107 to 63256126 19 + TSS region transcription start site region 56785
Tssr56786 6 63256359 to 63256381 22 + TSS region transcription start site region 56786
Tssr56787 6 63256621 to 63256627 6 + TSS region transcription start site region 56787
Tssr56788 6 63257807 to 63257809 2 + TSS region transcription start site region 56788
Tssr56789 6 63257913 to 63257923 10 + TSS region transcription start site region 56789
Gm44071 6 63324672 to 63328441 3769 - antisense lncRNA gene predicted gene, 44071
Tssr61204 6 63328436 to 63328449 13 - TSS region transcription start site region 61204
Tssr56790 6 63331509 to 63331512 3 + TSS region transcription start site region 56790
Tssr56791 6 63336734 to 63336737 3 + TSS region transcription start site region 56791
D6Rck301 6 63360427 to 63360673 246 DNA segment DNA segment, Chr 6, Rockefeller University 301