Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:60902083-63202087

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mmrn1 6 60944317 to 60989378 45061 + protein coding gene multimerin 1
Tssr56764 6 60944472 to 60944489 17 + TSS region transcription start site region 56764
Tssr61201 6 60993834 to 60993839 5 - TSS region transcription start site region 61201
Gm18838 6 61016852 to 61017736 884 - pseudogene predicted gene, 18838
D6Slab6 6 61034987 to 61035141 154 DNA segment DNA segment, Chr 6, Schoepfer Lab 6
D6Slab14 6 61037064 to 61037200 136 DNA segment DNA segment, Chr 6, Schoepfer Lab 14
D6Slab15 6 61039043 to 61040095 1052 DNA segment DNA segment, Chr 6, Schoepfer Lab 15
D6Slab16 6 61041158 to 61041341 183 DNA segment DNA segment, Chr 6, Schoepfer Lab 16
Gm43892 6 61044729 to 61044993 264 - pseudogene predicted gene, 43892
D6Slab7 6 61050498 to 61050784 286 DNA segment DNA segment, Chr 6, Schoepfer Lab 7
Gm43893 6 61064705 to 61069255 4550 - lincRNA gene predicted gene, 43893
D6Slab8 6 61113622 to 61113945 323 DNA segment DNA segment, Chr 6, Schoepfer Lab 8
Gm43894 6 61147220 to 61147907 687 - lincRNA gene predicted gene, 43894
A730020E08Rik 6 61175604 to 61180810 5206 - bidirectional promoter lncRNA gene RIKEN cDNA A730020E08 gene
Cpgi17494 6 61179877 to 61181382 1505 CpG island CpG island 17494
Tssr56765 6 61179974 to 61180002 28 + TSS region transcription start site region 56765
Tssr61202 6 61180176 to 61180210 34 - TSS region transcription start site region 61202
Tssr56766 6 61180313 to 61180400 87 + TSS region transcription start site region 56766
Ccser1 6 61180325 to 62382863 1202538 + protein coding gene coiled-coil serine rich 1
Tssr56767 6 61180443 to 61180488 45 + TSS region transcription start site region 56767
Tssr56768 6 61180490 to 61180513 23 + TSS region transcription start site region 56768
D6Slab9 6 61189562 to 61189799 237 DNA segment DNA segment, Chr 6, Schoepfer Lab 9
Tssr56769 6 61204843 to 61204851 8 + TSS region transcription start site region 56769
B230204D01Rik 6 61231733 to 61234462 2729 unclassified gene RIKEN cDNA B230204D01 gene
Tssr56770 6 61350978 to 61350983 5 + TSS region transcription start site region 56770
D6Slab10 6 61389364 to 61389654 290 DNA segment DNA segment, Chr 6, Schoepfer Lab 10
Gm43898 6 61400607 to 61401030 423 + pseudogene predicted gene, 43898
D6Mit356 6 61581138 to 61581246 108 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 356
Gm43896 6 61975098 to 61977129 2031 + unclassified gene predicted gene, 43896
A730075L09Rik 6 61993053 to 61996388 3335 unclassified gene RIKEN cDNA A730075L09 gene
Tssr56771 6 62050815 to 62050842 27 + TSS region transcription start site region 56771
Tssr56772 6 62052083 to 62052087 4 + TSS region transcription start site region 56772
Tssr56773 6 62057057 to 62057060 3 + TSS region transcription start site region 56773
Tssr56774 6 62109096 to 62109101 5 + TSS region transcription start site region 56774
Tssr56775 6 62119536 to 62119541 5 + TSS region transcription start site region 56775
Tssr56776 6 62165963 to 62165967 4 + TSS region transcription start site region 56776
Tssr56777 6 62167227 to 62167233 6 + TSS region transcription start site region 56777
Gm43897 6 62293702 to 62294010 308 - pseudogene predicted gene, 43897
Gm43895 6 62307727 to 62309262 1535 - pseudogene predicted gene, 43895
Gm19237 6 62582103 to 62583184 1081 + pseudogene predicted gene, 19237
Gm44088 6 62630581 to 62630817 236 + pseudogene predicted gene, 44088
Tssr56778 6 62638159 to 62638186 27 + TSS region transcription start site region 56778
D6Mit94 6 62665403 to 62665574 171 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 94
Gm44092 6 62756797 to 62757054 257 + pseudogene predicted gene, 44092
Gm18540 6 62820108 to 62820633 525 + pseudogene predicted gene, 18540
Gm5001 6 62929146 to 62929476 330 + pseudogene predicted gene 5001
Tssr61203 6 63031014 to 63031015 1 - TSS region transcription start site region 61203
Gm19131 6 63046128 to 63046733 605 - pseudogene predicted gene, 19131
Nasp-ps1 6 63160275 to 63160965 690 + pseudogene nuclear autoantigenic sperm protein (histone-binding), pseudogene 1
Gm22212 6 63200041 to 63200146 105 - snRNA gene predicted gene, 22212