Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:60136933-60787114

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5570 6 60078019 to 60150045 72026 + lincRNA gene predicted gene 5570
Tssr56761 6 60177654 to 60177678 24 + TSS region transcription start site region 56761
Gm46985 6 60179142 to 60181776 2634 + protein coding gene predicted gene, 46985
n-R5s162 6 60250792 to 60250910 118 + rRNA gene nuclear encoded rRNA 5S 162
A530053G22Rik 6 60279043 to 60403707 124664 - lncRNA gene RIKEN cDNA A530053G22 gene
Gm35335 6 60339805 to 60374268 34463 + lncRNA gene predicted gene, 35335
D6Slab2 6 60393081 to 60393287 206 DNA segment DNA segment, Chr 6, Schoepfer Lab 2
Tssr61185 6 60403667 to 60403681 14 - TSS region transcription start site region 61185
Tssr61186 6 60403692 to 60403712 20 - TSS region transcription start site region 61186
Gm38823 6 60411196 to 60449685 38489 + lncRNA gene predicted gene, 38823
Gm44389 6 60461933 to 60462114 181 - pseudogene predicted gene, 44389
Tssr61187 6 60462209 to 60462212 3 - TSS region transcription start site region 61187
Tssr56762 6 60485971 to 60485992 21 + TSS region transcription start site region 56762
Tssr1862 6 60486015 to 60486017 2 + TSS region transcription start site region 1862
Gm44410 6 60489956 to 60490445 489 + lincRNA gene predicted gene, 44410
Tssr56763 6 60586768 to 60586792 24 + TSS region transcription start site region 56763
Gm35386 6 60586778 to 60591189 4411 + lincRNA gene predicted gene, 35386
D6Slab3 6 60587716 to 60587910 194 DNA segment DNA segment, Chr 6, Schoepfer Lab 3
D6Slab4 6 60642052 to 60642445 393 DNA segment DNA segment, Chr 6, Schoepfer Lab 4
D6Slab11 6 60673740 to 60674090 350 DNA segment DNA segment, Chr 6, Schoepfer Lab 11
D6Slab12 6 60677785 to 60678170 385 DNA segment DNA segment, Chr 6, Schoepfer Lab 12
D6Slab13 6 60682517 to 60682820 303 DNA segment DNA segment, Chr 6, Schoepfer Lab 13
Tssr61188 6 60687305 to 60687316 11 - TSS region transcription start site region 61188
D6Slab5 6 60699961 to 60700347 386 DNA segment DNA segment, Chr 6, Schoepfer Lab 5
Snca 6 60731575 to 60829855 98280 - protein coding gene synuclein, alpha
Tssr61189 6 60759724 to 60759747 23 - TSS region transcription start site region 61189
Tssr61190 6 60760193 to 60760215 22 - TSS region transcription start site region 61190
Mageb16-ps2 6 60769967 to 60771059 1092 - pseudogene melanoma antigen family B, 16, pseudogene 2
Tssr61191 6 60774235 to 60774237 2 - TSS region transcription start site region 61191
D6Mit357 6 60779055 to 60779153 98 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 357