MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:58839175-58979179

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Herc3	6	58831465 to 58920398	88933	+	protein coding gene	hect domain and RLD 3
Tssr56751	6	58862879 to 58862910	31	+	TSS region	transcription start site region 56751
Tssr56752	6	58862964 to 58862976	12	+	TSS region	transcription start site region 56752
Nap1l5	6	58905233 to 58907076	1843	-	protein coding gene	nucleosome assembly protein 1-like 5
Tssr61172	6	58906250 to 58906261	11	-	TSS region	transcription start site region 61172
Cpgi17490	6	58906502 to 58907297	795		CpG island	CpG island 17490
Tssr56753	6	58906544 to 58906579	35	+	TSS region	transcription start site region 56753
Tssr61173	6	58907025 to 58907042	17	-	TSS region	transcription start site region 61173
Tssr61174	6	58907053 to 58907098	45	-	TSS region	transcription start site region 61174
Tssr61175	6	58907101 to 58907119	18	-	TSS region	transcription start site region 61175
Tssr61176	6	58907120 to 58907131	11	-	TSS region	transcription start site region 61176
Tssr56754	6	58909175 to 58909179	4	+	TSS region	transcription start site region 56754
Fam13a	6	58933536 to 59024502	90966	-	protein coding gene	family with sequence similarity 13, member A
Gm45060	6	58964874 to 58972234	7360	+	antisense lncRNA gene	predicted gene 45060
8430415O14Rik	6	58965215 to 58992308	27093	+	lncRNA gene	RIKEN cDNA 8430415O14 gene
Tssr61177	6	58965499 to 58965523	24	-	TSS region	transcription start site region 61177
BB365896	6	58965655 to 59002083	36428	+	antisense lncRNA gene	expressed sequence BB365896
Gm45061	6	58973197 to 58975291	2094	+	unclassified gene	predicted gene 45061