MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:58821465-58930398

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi17489	6	58831015 to 58832063	1048		CpG island	CpG island 17489
Tssr56746	6	58831456 to 58831504	48	+	TSS region	transcription start site region 56746
Herc3	6	58831465 to 58920398	88933	+	protein coding gene	hect domain and RLD 3
Tssr56747	6	58831513 to 58831529	16	+	TSS region	transcription start site region 56747
Tssr56748	6	58831551 to 58831566	15	+	TSS region	transcription start site region 56748
Tssr56749	6	58831880 to 58831898	18	+	TSS region	transcription start site region 56749
Tssr56750	6	58833689 to 58833734	45	+	TSS region	transcription start site region 56750
Tssr56751	6	58862879 to 58862910	31	+	TSS region	transcription start site region 56751
Tssr56752	6	58862964 to 58862976	12	+	TSS region	transcription start site region 56752
Nap1l5	6	58905233 to 58907076	1843	-	protein coding gene	nucleosome assembly protein 1-like 5
Tssr61172	6	58906250 to 58906261	11	-	TSS region	transcription start site region 61172
Cpgi17490	6	58906502 to 58907297	795		CpG island	CpG island 17490
Tssr56753	6	58906544 to 58906579	35	+	TSS region	transcription start site region 56753
Tssr61173	6	58907025 to 58907042	17	-	TSS region	transcription start site region 61173
Tssr61174	6	58907053 to 58907098	45	-	TSS region	transcription start site region 61174
Tssr61175	6	58907101 to 58907119	18	-	TSS region	transcription start site region 61175
Tssr61176	6	58907120 to 58907131	11	-	TSS region	transcription start site region 61176
Tssr56754	6	58909175 to 58909179	4	+	TSS region	transcription start site region 56754