Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:58820233-58992076

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17489 6 58831015 to 58832063 1048 CpG island CpG island 17489
Tssr56746 6 58831456 to 58831504 48 + TSS region transcription start site region 56746
Herc3 6 58831465 to 58920398 88933 + protein coding gene hect domain and RLD 3
Tssr56747 6 58831513 to 58831529 16 + TSS region transcription start site region 56747
Tssr56748 6 58831551 to 58831566 15 + TSS region transcription start site region 56748
Tssr56749 6 58831880 to 58831898 18 + TSS region transcription start site region 56749
Tssr56750 6 58833689 to 58833734 45 + TSS region transcription start site region 56750
Tssr56751 6 58862879 to 58862910 31 + TSS region transcription start site region 56751
Tssr56752 6 58862964 to 58862976 12 + TSS region transcription start site region 56752
Nap1l5 6 58905233 to 58907076 1843 - protein coding gene nucleosome assembly protein 1-like 5
Tssr61172 6 58906250 to 58906261 11 - TSS region transcription start site region 61172
Cpgi17490 6 58906502 to 58907297 795 CpG island CpG island 17490
Tssr56753 6 58906544 to 58906579 35 + TSS region transcription start site region 56753
Tssr61173 6 58907025 to 58907042 17 - TSS region transcription start site region 61173
Tssr61174 6 58907053 to 58907098 45 - TSS region transcription start site region 61174
Tssr61175 6 58907101 to 58907119 18 - TSS region transcription start site region 61175
Tssr61176 6 58907120 to 58907131 11 - TSS region transcription start site region 61176
Tssr56754 6 58909175 to 58909179 4 + TSS region transcription start site region 56754
Fam13a 6 58933536 to 59024502 90966 - protein coding gene family with sequence similarity 13, member A
Gm45060 6 58964874 to 58972234 7360 + antisense lncRNA gene predicted gene 45060
8430415O14Rik 6 58965215 to 58992308 27093 + lncRNA gene RIKEN cDNA 8430415O14 gene
Tssr61177 6 58965499 to 58965523 24 - TSS region transcription start site region 61177
BB365896 6 58965655 to 59002083 36428 + antisense lncRNA gene expressed sequence BB365896
Gm45061 6 58973197 to 58975291 2094 + unclassified gene predicted gene 45061