Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:58228975-58889255

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r-ps19 6 58256643 to 58257547 904 - pseudogene vomeronasal 1 receptor, pseudogene 19
Vmn1r28 6 58262294 to 58266082 3788 + protein coding gene vomeronasal 1 receptor 28
Vmn1r29 6 58307297 to 58308208 911 + protein coding gene vomeronasal 1 receptor 29
Gm20674 6 58394054 to 58394422 368 + pseudogene predicted gene 20674
Vmn1r-ps20 6 58406413 to 58407327 914 - pseudogene vomeronasal 1 receptor, pseudogene 20
Vmn1r30 6 58434848 to 58443624 8776 - protein coding gene vomeronasal 1 receptor 30
Gm44016 6 58438695 to 58438858 163 - pseudogene predicted gene, 44016
Vmn1r-ps21 6 58455097 to 58455993 896 - pseudogene vomeronasal 1 receptor, pseudogene 21
Gm20673 6 58461107 to 58461536 429 + pseudogene predicted gene 20673
Vmn1r31 6 58471967 to 58472878 911 - protein coding gene vomeronasal 1 receptor 31
Vmn1r-ps22 6 58494348 to 58495247 899 - pseudogene vomeronasal 1 receptor, pseudogene 22
Gm35077 6 58497956 to 58533690 35734 - lincRNA gene predicted gene, 35077
Vmn1r-ps23 6 58504483 to 58504695 212 - pseudogene vomeronasal 1 receptor, pseudogene 23
Gm20672 6 58512271 to 58512531 260 + pseudogene predicted gene 20672
Tssr61169 6 58533613 to 58533640 27 - TSS region transcription start site region 61169
Gm45943 6 58533975 to 58584255 50280 - protein coding gene predicted gene, 45943
Abcg2 6 58584491 to 58692451 107960 + protein coding gene ATP binding cassette subfamily G member 2 (Junior blood group)
Tssr56739 6 58596584 to 58596615 31 + TSS region transcription start site region 56739
Tssr56740 6 58596698 to 58596710 12 + TSS region transcription start site region 56740
V25Dq4 6 58600000 to 58600000 0 QTL vitamin D inactive form serum level QTL 4
Cpgi17488 6 58640273 to 58640909 636 CpG island CpG island 17488
Tssr56741 6 58640536 to 58640596 60 + TSS region transcription start site region 56741
Tssr56742 6 58640598 to 58640610 12 + TSS region transcription start site region 56742
Tssr56743 6 58643996 to 58644007 11 + TSS region transcription start site region 56743
Tssr56744 6 58644010 to 58644056 46 + TSS region transcription start site region 56744
Tssr56745 6 58644212 to 58644217 5 + TSS region transcription start site region 56745
2310061B05Rik 6 58679710 to 58680634 924 unclassified gene RIKEN cDNA 2310061B05 gene
Gm38822 6 58758909 to 58813748 54839 - lncRNA gene predicted gene, 38822
Tssr61170 6 58780511 to 58780526 15 - TSS region transcription start site region 61170
Tssr61171 6 58780535 to 58780567 32 - TSS region transcription start site region 61171
Gm43899 6 58781692 to 58781937 245 - pseudogene predicted gene, 43899
Cpgi17489 6 58831015 to 58832063 1048 CpG island CpG island 17489
Tssr56746 6 58831456 to 58831504 48 + TSS region transcription start site region 56746
Herc3 6 58831465 to 58920398 88933 + protein coding gene hect domain and RLD 3
Tssr56747 6 58831513 to 58831529 16 + TSS region transcription start site region 56747
Tssr56748 6 58831551 to 58831566 15 + TSS region transcription start site region 56748
Tssr56749 6 58831880 to 58831898 18 + TSS region transcription start site region 56749
Tssr56750 6 58833689 to 58833734 45 + TSS region transcription start site region 56750
Tssr56751 6 58862879 to 58862910 31 + TSS region transcription start site region 56751
Tssr56752 6 58862964 to 58862976 12 + TSS region transcription start site region 56752