Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:57381697-57592671

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r18 6 57389668 to 57390567 899 - protein coding gene vomeronasal 1 receptor 18
Vmn1r19 6 57404464 to 57405390 926 + protein coding gene vomeronasal 1 receptor 19
Vmn1r20 6 57431691 to 57432602 911 + protein coding gene vomeronasal 1 receptor 20
Vmn1r-ps11 6 57447356 to 57448208 852 - pseudogene vomeronasal 1 receptor, pseudogene 11
4930533I22Rik 6 57476697 to 57497671 20974 + antisense lncRNA gene RIKEN cDNA 4930533I22 gene
Tssr1861 6 57485114 to 57485125 11 + TSS region transcription start site region 1861
Gm45193 6 57485121 to 57626030 140909 + unclassified non-coding RNA gene predicted gene 45193
Ppm1k 6 57506502 to 57535468 28966 - protein coding gene protein phosphatase 1K (PP2C domain containing)
Cpgi17483 6 57534755 to 57535260 505 CpG island CpG island 17483
Tssr61156 6 57535368 to 57535395 27 - TSS region transcription start site region 61156
Tssr61157 6 57535410 to 57535421 11 - TSS region transcription start site region 61157
Tssr61158 6 57535422 to 57535447 25 - TSS region transcription start site region 61158
Tssr61159 6 57535477 to 57535497 20 - TSS region transcription start site region 61159
Tssr61160 6 57535499 to 57535513 14 - TSS region transcription start site region 61160
Cpgi17484 6 57535531 to 57535867 336 CpG island CpG island 17484
Tssr61161 6 57541088 to 57541092 4 - TSS region transcription start site region 61161
Gm27896 6 57565793 to 57566109 316 + unclassified non-coding RNA gene predicted gene, 27896
Tssr56691 6 57580971 to 57580985 14 + TSS region transcription start site region 56691
Tssr56692 6 57580994 to 57581015 21 + TSS region transcription start site region 56692
Herc6 6 57581000 to 57664632 83632 + protein coding gene hect domain and RLD 6
Tssr56693 6 57581060 to 57581115 55 + TSS region transcription start site region 56693
Tssr56694 6 57581125 to 57581138 13 + TSS region transcription start site region 56694
Tssr56695 6 57581308 to 57581316 8 + TSS region transcription start site region 56695
Tssr56696 6 57581540 to 57581556 16 + TSS region transcription start site region 56696
Tssr56697 6 57581581 to 57581593 12 + TSS region transcription start site region 56697
Tssr56698 6 57581622 to 57581636 14 + TSS region transcription start site region 56698
Tssr56699 6 57581702 to 57581728 26 + TSS region transcription start site region 56699
Tssr56700 6 57581780 to 57581794 14 + TSS region transcription start site region 56700
Tssr56701 6 57582594 to 57582608 14 + TSS region transcription start site region 56701
Tssr56702 6 57582624 to 57582635 11 + TSS region transcription start site region 56702
Tssr56703 6 57582654 to 57582665 11 + TSS region transcription start site region 56703
Tssr56704 6 57582702 to 57582718 16 + TSS region transcription start site region 56704
Tssr56705 6 57582775 to 57582790 15 + TSS region transcription start site region 56705
Tssr56706 6 57582801 to 57582826 25 + TSS region transcription start site region 56706
Tssr56707 6 57582833 to 57582852 19 + TSS region transcription start site region 56707
Tssr56708 6 57582854 to 57582863 9 + TSS region transcription start site region 56708