Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:57347356-57548208

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vmn1r17	6	57360467 to 57361378	911	-	protein coding gene	vomeronasal 1 receptor 17
Tssr56690	6	57366112 to 57366141	29	+	TSS region	transcription start site region 56690
Vmn1r18	6	57389668 to 57390567	899	-	protein coding gene	vomeronasal 1 receptor 18
Vmn1r19	6	57404464 to 57405390	926	+	protein coding gene	vomeronasal 1 receptor 19
Vmn1r20	6	57431691 to 57432602	911	+	protein coding gene	vomeronasal 1 receptor 20
Vmn1r-ps11	6	57447356 to 57448208	852	-	pseudogene	vomeronasal 1 receptor, pseudogene 11
4930533I22Rik	6	57476697 to 57497671	20974	+	antisense lncRNA gene	RIKEN cDNA 4930533I22 gene
Tssr1861	6	57485114 to 57485125	11	+	TSS region	transcription start site region 1861
Gm45193	6	57485121 to 57626030	140909	+	unclassified non-coding RNA gene	predicted gene 45193
Ppm1k	6	57506502 to 57535468	28966	-	protein coding gene	protein phosphatase 1K (PP2C domain containing)
Cpgi17483	6	57534755 to 57535260	505		CpG island	CpG island 17483
Tssr61156	6	57535368 to 57535395	27	-	TSS region	transcription start site region 61156
Tssr61157	6	57535410 to 57535421	11	-	TSS region	transcription start site region 61157
Tssr61158	6	57535422 to 57535447	25	-	TSS region	transcription start site region 61158
Tssr61159	6	57535477 to 57535497	20	-	TSS region	transcription start site region 61159
Tssr61160	6	57535499 to 57535513	14	-	TSS region	transcription start site region 61160
Cpgi17484	6	57535531 to 57535867	336		CpG island	CpG island 17484
Tssr61161	6	57541088 to 57541092	4	-	TSS region	transcription start site region 61161