MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:56747495-56847553

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Avl9	6	56714905 to 56761912	47007	+	protein coding gene	AVL9 cell migration associated
3110035G12Rik	6	56775823 to 56777345	1522		unclassified gene	RIKEN cDNA 3110035G12 gene
Kbtbd2	6	56777524 to 56797813	20289	-	protein coding gene	kelch repeat and BTB (POZ) domain containing 2
Tssr61140	6	56784423 to 56784426	3	-	TSS region	transcription start site region 61140
Tssr61141	6	56796721 to 56796751	30	-	TSS region	transcription start site region 61141
Cpgi17480	6	56796970 to 56798289	1319		CpG island	CpG island 17480
Tssr61142	6	56797495 to 56797553	58	-	TSS region	transcription start site region 61142
Gm10209	6	56797591 to 56799197	1606	+	protein coding gene	predicted gene 10209
Tssr61143	6	56797637 to 56797757	120	-	TSS region	transcription start site region 61143
Tssr61144	6	56797761 to 56797786	25	-	TSS region	transcription start site region 61144
Tssr61145	6	56800230 to 56800236	6	-	TSS region	transcription start site region 61145
Tssr61146	6	56804314 to 56804315	1	-	TSS region	transcription start site region 61146
Cpgi17481	6	56831866 to 56832659	793		CpG island	CpG island 17481
Fkbp9	6	56832059 to 56879358	47299	+	protein coding gene	FK506 binding protein 9
Tssr56685	6	56832099 to 56832160	61	+	TSS region	transcription start site region 56685
Tssr56686	6	56832163 to 56832175	12	+	TSS region	transcription start site region 56686
Tssr56687	6	56832898 to 56832901	3	+	TSS region	transcription start site region 56687
Tssr61147	6	56837347 to 56837362	15	-	TSS region	transcription start site region 61147