MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:56644958-56784971

Filter by:

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm8239	6	56581203 to 56652487	71284	-	lincRNA gene	predicted gene 8239
Cpgi17477	6	56652093 to 56652548	455		CpG island	CpG island 17477
Lsm5	6	56701063 to 56704699	3636	-	protein coding gene	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi17478	6	56704182 to 56704858	676		CpG island	CpG island 17478
Tssr61138	6	56704673 to 56704712	39	-	TSS region	transcription start site region 61138
4933427C19Rik	6	56714499 to 56715731	1232		unclassified gene	RIKEN cDNA 4933427C19 gene
Cpgi17479	6	56714581 to 56715588	1007		CpG island	CpG island 17479
Tssr56680	6	56714821 to 56714853	32	+	TSS region	transcription start site region 56680
Tssr56681	6	56714866 to 56714883	17	+	TSS region	transcription start site region 56681
Tssr56682	6	56714891 to 56714951	60	+	TSS region	transcription start site region 56682
Avl9	6	56714905 to 56761912	47007	+	protein coding gene	AVL9 cell migration associated
Tssr56683	6	56714958 to 56714971	13	+	TSS region	transcription start site region 56683
Tssr1859	6	56715006 to 56715015	9	+	TSS region	transcription start site region 1859
Tssr61139	6	56715452 to 56715468	16	-	TSS region	transcription start site region 61139
Tssr56684	6	56746548 to 56746559	11	+	TSS region	transcription start site region 56684
3110035G12Rik	6	56775823 to 56777345	1522		unclassified gene	RIKEN cDNA 3110035G12 gene
Kbtbd2	6	56777524 to 56797813	20289	-	protein coding gene	kelch repeat and BTB (POZ) domain containing 2
Tssr61140	6	56784423 to 56784426	3	-	TSS region	transcription start site region 61140