Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:55461895-56353735

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hdlk 6 50864934 to 55556043 4691109 heritable phenotypic marker hypodactyly like
Adcyap1r1 6 55451978 to 55501451 49473 + protein coding gene adenylate cyclase activating polypeptide 1 receptor 1
Tssr56670 6 55467440 to 55467441 1 + TSS region transcription start site region 56670
Tssr56671 6 55484608 to 55484613 5 + TSS region transcription start site region 56671
Tssr56672 6 55491230 to 55491243 13 + TSS region transcription start site region 56672
Gm44352 6 55533506 to 55533615 109 + miRNA gene predicted gene, 44352
Gm34441 6 55537043 to 55651785 114742 + lncRNA gene predicted gene, 34441
D6Dcr11 6 55555944 to 55556044 100 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 11
D6Mit316 6 55555949 to 55556043 94 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 316
Gm3729 6 55625079 to 55625607 528 + pseudogene predicted gene 3729
Cpgi17475 6 55676856 to 55677339 483 CpG island CpG island 17475
Neurod6 6 55677822 to 55681263 3441 - protein coding gene neurogenic differentiation 6
Tssr61116 6 55678525 to 55678539 14 - TSS region transcription start site region 61116
Tssr61117 6 55678548 to 55678569 21 - TSS region transcription start site region 61117
Tssr61118 6 55679058 to 55679072 14 - TSS region transcription start site region 61118
Tssr61119 6 55679317 to 55679344 27 - TSS region transcription start site region 61119
Tssr61120 6 55679614 to 55679634 20 - TSS region transcription start site region 61120
Tssr61121 6 55681048 to 55681108 60 - TSS region transcription start site region 61121
Tssr56673 6 55681187 to 55681201 14 + TSS region transcription start site region 56673
Tssr56674 6 55681208 to 55681239 31 + TSS region transcription start site region 56674
Tssr61122 6 55681257 to 55681271 14 - TSS region transcription start site region 61122
Tssr56675 6 55681288 to 55681305 17 + TSS region transcription start site region 56675
Tssr61123 6 55681330 to 55681341 11 - TSS region transcription start site region 61123
Gm3279 6 55684571 to 55694574 10003 + lincRNA gene predicted gene 3279
D0Nds23 6 55690862 to 55690935 73 DNA segment DNA segment, Nuffield Department of Surgery 23
Gm34676 6 55700566 to 55705885 5319 + lncRNA gene predicted gene, 34676
Gm38820 6 55789594 to 55804700 15106 - lncRNA gene predicted gene, 38820
Tssr56676 6 55836878 to 55836900 22 + TSS region transcription start site region 56676
Itprid1 6 55836895 to 55978735 141840 + protein coding gene ITPR interacting domain containing 1
D6Mit278 6 55972928 to 55973049 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 278
Tssr56677 6 56017489 to 56017517 28 + TSS region transcription start site region 56677
Ppp1r17 6 56017515 to 56032688 15173 + protein coding gene protein phosphatase 1, regulatory subunit 17
Gm18099 6 56060940 to 56061480 540 - pseudogene predicted gene, 18099
Pde1c 6 56069804 to 56569103 499299 - protein coding gene phosphodiesterase 1C
Tssr56678 6 56125083 to 56125088 5 + TSS region transcription start site region 56678
Tssr61124 6 56157167 to 56157206 39 - TSS region transcription start site region 61124
Gm44413 6 56172928 to 56173031 103 - miRNA gene predicted gene, 44413
D6Mit1001 6 56302626 to 56302796 170 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 1001
Tssr61125 6 56311155 to 56311157 2 - TSS region transcription start site region 61125