MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:54962910-55022921

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nod1	6	54923949 to 54972612	48663	-	protein coding gene	nucleotide-binding oligomerization domain containing 1
Tssr61098	6	54964702 to 54964708	6	-	TSS region	transcription start site region 61098
Tssr61099	6	54967230 to 54967232	2	-	TSS region	transcription start site region 61099
Cpgi17469	6	54972223 to 54972739	516		CpG island	CpG island 17469
Tssr61100	6	54972396 to 54972424	28	-	TSS region	transcription start site region 61100
Tssr61101	6	54972428 to 54972466	38	-	TSS region	transcription start site region 61101
Tssr61102	6	54972560 to 54972583	23	-	TSS region	transcription start site region 61102
Tssr61103	6	54972603 to 54972626	23	-	TSS region	transcription start site region 61103
Tssr61104	6	54972628 to 54972643	15	-	TSS region	transcription start site region 61104
Gm24230	6	54974651 to 54974779	128	+	snoRNA gene	predicted gene, 24230
Ggct	6	54985095 to 54992961	7866	-	protein coding gene	gamma-glutamyl cyclotransferase
Cpgi17470	6	54992439 to 54993348	909		CpG island	CpG island 17470
Tssr61105	6	54992858 to 54992878	20	-	TSS region	transcription start site region 61105
Tssr61106	6	54992882 to 54992907	25	-	TSS region	transcription start site region 61106
Tssr61107	6	54992910 to 54992921	11	-	TSS region	transcription start site region 61107
Tssr61108	6	54992925 to 54992936	11	-	TSS region	transcription start site region 61108
Tssr61109	6	54992946 to 54992957	11	-	TSS region	transcription start site region 61109
Gm38539	6	55002120 to 55003998	1878	+	lncRNA gene	predicted gene, 38539