Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:54465736-54666504

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wipf3 6 54429603 to 54503768 74165 + protein coding gene WAS/WASL interacting protein family, member 3
Gm44026 6 54463685 to 54473170 9485 - antisense lncRNA gene predicted gene, 44026
Tssr61076 6 54473154 to 54473174 20 - TSS region transcription start site region 61076
Cpgi17460 6 54485686 to 54485979 293 CpG island CpG island 17460
Scrn1 6 54501173 to 54566489 65316 - protein coding gene secernin 1
Tssr61077 6 54523721 to 54523725 4 - TSS region transcription start site region 61077
Tssr61078 6 54531097 to 54531106 9 - TSS region transcription start site region 61078
Tssr61079 6 54531124 to 54531137 13 - TSS region transcription start site region 61079
Tssr61080 6 54541718 to 54541722 4 - TSS region transcription start site region 61080
Cpgi17461 6 54565736 to 54566504 768 CpG island CpG island 17461
Tssr61081 6 54566278 to 54566281 3 - TSS region transcription start site region 61081
Tssr61082 6 54566283 to 54566296 13 - TSS region transcription start site region 61082
Tssr61083 6 54566326 to 54566413 87 - TSS region transcription start site region 61083
Tssr61084 6 54566446 to 54566453 7 - TSS region transcription start site region 61084
Tssr61085 6 54566460 to 54566483 23 - TSS region transcription start site region 61085
Tssr61086 6 54566484 to 54566491 7 - TSS region transcription start site region 61086
Tssr61087 6 54566499 to 54566508 9 - TSS region transcription start site region 61087
Fkbp14 6 54577602 to 54593698 16096 - protein coding gene FK506 binding protein 14
Tssr61088 6 54593139 to 54593217 78 - TSS region transcription start site region 61088
Cpgi17462 6 54594873 to 54595874 1001 CpG island CpG island 17462
Plekha8 6 54595111 to 54645823 50712 + protein coding gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
Tssr56617 6 54595167 to 54595243 76 + TSS region transcription start site region 56617
Tssr56618 6 54595244 to 54595264 20 + TSS region transcription start site region 56618
Tssr56619 6 54595272 to 54595292 20 + TSS region transcription start site region 56619
Tssr56620 6 54596714 to 54596722 8 + TSS region transcription start site region 56620
Gm34249 6 54659435 to 54662558 3123 + lncRNA gene predicted gene, 34249