MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:53924646-54154695

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpvl	6	53873279 to 53978671	105392	-	protein coding gene	carboxypeptidase, vitellogenic-like
4921529L05Rik	6	53978691 to 54017383	38692	+	lncRNA gene	RIKEN cDNA 4921529L05 gene
Tssr56578	6	53978696 to 53978715	19	+	TSS region	transcription start site region 56578
Tssr56579	6	53978722 to 53978730	8	+	TSS region	transcription start site region 56579
Cpgi17457	6	54038977 to 54040670	1693		CpG island	CpG island 17457
Tssr56580	6	54039497 to 54039556	59	+	TSS region	transcription start site region 56580
Tssr56581	6	54039558 to 54039575	17	+	TSS region	transcription start site region 56581
Tssr56582	6	54039590 to 54039605	15	+	TSS region	transcription start site region 56582
Tssr56583	6	54039646 to 54039695	49	+	TSS region	transcription start site region 56583
Tssr56584	6	54039709 to 54039733	24	+	TSS region	transcription start site region 56584
Tssr56585	6	54039746 to 54039761	15	+	TSS region	transcription start site region 56585
Tssr61068	6	54039888 to 54039892	4	-	TSS region	transcription start site region 61068
Chn2	6	54039932 to 54301812	261880	+	protein coding gene	chimerin 2
Tssr56586	6	54039935 to 54040016	81	+	TSS region	transcription start site region 56586
Tssr56587	6	54040078 to 54040091	13	+	TSS region	transcription start site region 56587
Tssr56588	6	54041378 to 54041382	4	+	TSS region	transcription start site region 56588
9530036M11Rik	6	54146887 to 54150937	4050	-	antisense lncRNA gene	RIKEN cDNA 9530036M11 gene
Tssr61069	6	54151032 to 54151052	20	-	TSS region	transcription start site region 61069