Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:53659783-54030054

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Creb5 6 53287270 to 53700376 413106 + protein coding gene cAMP responsive element binding protein 5
Gm44080 6 53667770 to 53669983 2213 + unclassified gene predicted gene, 44080
Tssr56569 6 53680935 to 53680958 23 + TSS region transcription start site region 56569
Tssr56570 6 53680978 to 53680989 11 + TSS region transcription start site region 56570
Tssr56571 6 53681013 to 53681060 47 + TSS region transcription start site region 56571
Tssr56572 6 53681074 to 53681110 36 + TSS region transcription start site region 56572
Tssr61055 6 53681078 to 53681094 16 - TSS region transcription start site region 61055
Tssr56573 6 53681112 to 53681143 31 + TSS region transcription start site region 56573
Tssr56574 6 53698000 to 53698015 15 + TSS region transcription start site region 56574
Tssr56575 6 53698024 to 53698036 12 + TSS region transcription start site region 56575
Tssr56576 6 53698066 to 53698069 3 + TSS region transcription start site region 56576
Tssr56577 6 53698098 to 53698101 3 + TSS region transcription start site region 56577
Tssr61056 6 53710715 to 53710746 31 - TSS region transcription start site region 61056
Cpgi17454 6 53713349 to 53713530 181 CpG island CpG island 17454
Hrtr1 6 53764478 to 53764478 0 QTL heart rate 1
Gm5306 6 53777384 to 53778140 756 + pseudogene predicted gene 5306
Tril 6 53815468 to 53820825 5357 - protein coding gene TLR4 interactor with leucine-rich repeats
Cpgi17455 6 53817509 to 53821134 3625 CpG island CpG island 17455
Tssr61057 6 53820449 to 53820473 24 - TSS region transcription start site region 61057
Tssr61058 6 53820476 to 53820506 30 - TSS region transcription start site region 61058
Tssr61059 6 53820509 to 53820526 17 - TSS region transcription start site region 61059
Tssr61060 6 53820563 to 53820578 15 - TSS region transcription start site region 61060
Tssr61061 6 53820715 to 53820747 32 - TSS region transcription start site region 61061
Tssr61062 6 53820749 to 53820758 9 - TSS region transcription start site region 61062
Tssr61063 6 53820764 to 53820837 73 - TSS region transcription start site region 61063
Tssr61064 6 53820848 to 53820859 11 - TSS region transcription start site region 61064
Tssr61065 6 53820902 to 53820913 11 - TSS region transcription start site region 61065
Tssr61066 6 53820944 to 53820955 11 - TSS region transcription start site region 61066
Tssr61067 6 53821224 to 53821259 35 - TSS region transcription start site region 61067
4930566K11Rik 6 53844169 to 53845055 886 unclassified gene RIKEN cDNA 4930566K11 gene
Cpgi17456 6 53844783 to 53845054 271 CpG island CpG island 17456
Gm16499 6 53844899 to 53858947 14048 + lincRNA gene predicted gene 16499
Gm22910 6 53872017 to 53872148 131 - snoRNA gene predicted gene, 22910
Cpvl 6 53873279 to 53978671 105392 - protein coding gene carboxypeptidase, vitellogenic-like
Gm33716 6 53880763 to 53883101 2338 + lncRNA gene predicted gene, 33716
4921529L05Rik 6 53978691 to 54017383 38692 + lncRNA gene RIKEN cDNA 4921529L05 gene
Tssr56578 6 53978696 to 53978715 19 + TSS region transcription start site region 56578
Tssr56579 6 53978722 to 53978730 8 + TSS region transcription start site region 56579