Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:53578000-53818015

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Creb5 6 53287270 to 53700376 413106 + protein coding gene cAMP responsive element binding protein 5
Gm33392 6 53581351 to 53592876 11525 - lncRNA gene predicted gene, 33392
Tssr61054 6 53592318 to 53592329 11 - TSS region transcription start site region 61054
Tssr56558 6 53592976 to 53592982 6 + TSS region transcription start site region 56558
Tssr56559 6 53604531 to 53604546 15 + TSS region transcription start site region 56559
Tssr56560 6 53610464 to 53610477 13 + TSS region transcription start site region 56560
Tssr56561 6 53619903 to 53619941 38 + TSS region transcription start site region 56561
Tssr56562 6 53620453 to 53620472 19 + TSS region transcription start site region 56562
Tssr56563 6 53620530 to 53620566 36 + TSS region transcription start site region 56563
Tssr56564 6 53621199 to 53621206 7 + TSS region transcription start site region 56564
Tssr56565 6 53629739 to 53629763 24 + TSS region transcription start site region 56565
Tssr56566 6 53629783 to 53629796 13 + TSS region transcription start site region 56566
Tssr56567 6 53629931 to 53629961 30 + TSS region transcription start site region 56567
Tssr56568 6 53644388 to 53644394 6 + TSS region transcription start site region 56568
Gm44080 6 53667770 to 53669983 2213 + unclassified gene predicted gene, 44080
Tssr56569 6 53680935 to 53680958 23 + TSS region transcription start site region 56569
Tssr56570 6 53680978 to 53680989 11 + TSS region transcription start site region 56570
Tssr56571 6 53681013 to 53681060 47 + TSS region transcription start site region 56571
Tssr56572 6 53681074 to 53681110 36 + TSS region transcription start site region 56572
Tssr61055 6 53681078 to 53681094 16 - TSS region transcription start site region 61055
Tssr56573 6 53681112 to 53681143 31 + TSS region transcription start site region 56573
Tssr56574 6 53698000 to 53698015 15 + TSS region transcription start site region 56574
Tssr56575 6 53698024 to 53698036 12 + TSS region transcription start site region 56575
Tssr56576 6 53698066 to 53698069 3 + TSS region transcription start site region 56576
Tssr56577 6 53698098 to 53698101 3 + TSS region transcription start site region 56577
Tssr61056 6 53710715 to 53710746 31 - TSS region transcription start site region 61056
Cpgi17454 6 53713349 to 53713530 181 CpG island CpG island 17454
Hrtr1 6 53764478 to 53764478 0 QTL heart rate 1
Gm5306 6 53777384 to 53778140 756 + pseudogene predicted gene 5306
Tril 6 53815468 to 53820825 5357 - protein coding gene TLR4 interactor with leucine-rich repeats
Cpgi17455 6 53817509 to 53821134 3625 CpG island CpG island 17455