MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:53035550-53306735

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Jazf1	6	52768797 to 53068631	299834	-	protein coding gene	JAZF zinc finger 1
Gm15573	6	53045884 to 53046423	539	+	pseudogene	predicted gene 15573
Gm33097	6	53060089 to 53065948	5859	-	lncRNA gene	predicted gene, 33097
Cpgi17451	6	53067466 to 53069061	1595		CpG island	CpG island 17451
Tssr61050	6	53068562 to 53068656	94	-	TSS region	transcription start site region 61050
Tssr61051	6	53068706 to 53068765	59	-	TSS region	transcription start site region 61051
Gm8143	6	53170550 to 53171735	1185	-	pseudogene	predicted gene 8143
Gm4872	6	53221164 to 53224975	3811	+	lincRNA gene	predicted gene 4872
D6Mit184	6	53260728 to 53260856	128		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 184
Gm33348	6	53262475 to 53268233	5758	-	lncRNA gene	predicted gene, 33348
Cpgi17452	6	53286560 to 53286777	217		CpG island	CpG island 17452
Cpgi17453	6	53286826 to 53288392	1566		CpG island	CpG island 17453
Creb5	6	53287270 to 53700376	413106	+	protein coding gene	cAMP responsive element binding protein 5
Tssr56545	6	53287293 to 53287310	17	+	TSS region	transcription start site region 56545
Tssr56546	6	53287311 to 53287324	13	+	TSS region	transcription start site region 56546
Tssr56547	6	53287329 to 53287342	13	+	TSS region	transcription start site region 56547
Tssr56548	6	53287360 to 53287365	5	+	TSS region	transcription start site region 56548
D6Mit183	6	53296347 to 53296450	103		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 183
Aliq4	6	53296347 to 53296450	103		QTL	acute lung injury QTL 4