MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:52875089-53250948

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Jazf1	6	52768797 to 53068631	299834	-	protein coding gene	JAZF zinc finger 1
Tssr1850	6	52902680 to 52902688	8	+	TSS region	transcription start site region 1850
Tssr56543	6	52903791 to 52903828	37	+	TSS region	transcription start site region 56543
Tssr61045	6	52909559 to 52909574	15	-	TSS region	transcription start site region 61045
Tssr61046	6	52909581 to 52909609	28	-	TSS region	transcription start site region 61046
Tssr61047	6	52909618 to 52909621	3	-	TSS region	transcription start site region 61047
Tssr61048	6	52909631 to 52909644	13	-	TSS region	transcription start site region 61048
Tssr56544	6	52912661 to 52912671	10	+	TSS region	transcription start site region 56544
D6Ertd234e	6	52953621 to 52953869	248		DNA segment	DNA segment, Chr 6, ERATO Doi 234, expressed
Tssr61049	6	52961723 to 52961739	16	-	TSS region	transcription start site region 61049
Gm33219	6	52965158 to 52976556	11398	-	lncRNA gene	predicted gene, 33219
Gm26215	6	53010394 to 53010532	138	-	snoRNA gene	predicted gene, 26215
Gm15573	6	53045884 to 53046423	539	+	pseudogene	predicted gene 15573
Gm33097	6	53060089 to 53065948	5859	-	lncRNA gene	predicted gene, 33097
Cpgi17451	6	53067466 to 53069061	1595		CpG island	CpG island 17451
Tssr61050	6	53068562 to 53068656	94	-	TSS region	transcription start site region 61050
Tssr61051	6	53068706 to 53068765	59	-	TSS region	transcription start site region 61051
Gm8143	6	53170550 to 53171735	1185	-	pseudogene	predicted gene 8143
Gm4872	6	53221164 to 53224975	3811	+	lincRNA gene	predicted gene 4872