Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52721312-53011333

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tax1bp1 6 52713729 to 52766780 53051 + protein coding gene Tax1 (human T cell leukemia virus type I) binding protein 1
Tssr56533 6 52721366 to 52721379 13 + TSS region transcription start site region 56533
Tssr56534 6 52721394 to 52721428 34 + TSS region transcription start site region 56534
Gm43967 6 52722630 to 52722930 300 - pseudogene predicted gene, 43967
Tssr56535 6 52727192 to 52727230 38 + TSS region transcription start site region 56535
Tssr56536 6 52729331 to 52729370 39 + TSS region transcription start site region 56536
Tssr56537 6 52729412 to 52729445 33 + TSS region transcription start site region 56537
Tssr56538 6 52733184 to 52733199 15 + TSS region transcription start site region 56538
Tssr56539 6 52737077 to 52737111 34 + TSS region transcription start site region 56539
Tssr56540 6 52745695 to 52745698 3 + TSS region transcription start site region 56540
Jazf1 6 52768797 to 53068631 299834 - protein coding gene JAZF zinc finger 1
Tssr56541 6 52776133 to 52776145 12 + TSS region transcription start site region 56541
Tssr56542 6 52825840 to 52825859 19 + TSS region transcription start site region 56542
Gm15572 6 52843109 to 52843701 592 - pseudogene predicted gene 15572
Tssr61044 6 52866312 to 52866333 21 - TSS region transcription start site region 61044
Tssr1849 6 52866493 to 52866503 10 + TSS region transcription start site region 1849
Tssr1850 6 52902680 to 52902688 8 + TSS region transcription start site region 1850
Tssr56543 6 52903791 to 52903828 37 + TSS region transcription start site region 56543
Tssr61045 6 52909559 to 52909574 15 - TSS region transcription start site region 61045
Tssr61046 6 52909581 to 52909609 28 - TSS region transcription start site region 61046
Tssr61047 6 52909618 to 52909621 3 - TSS region transcription start site region 61047
Tssr61048 6 52909631 to 52909644 13 - TSS region transcription start site region 61048
Tssr56544 6 52912661 to 52912671 10 + TSS region transcription start site region 56544
D6Ertd234e 6 52953621 to 52953869 248 DNA segment DNA segment, Chr 6, ERATO Doi 234, expressed
Tssr61049 6 52961723 to 52961739 16 - TSS region transcription start site region 61049
Gm33219 6 52965158 to 52976556 11398 - lncRNA gene predicted gene, 33219
Gm26215 6 53010394 to 53010532 138 - snoRNA gene predicted gene, 26215