Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52523617-52903626

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hibadh 6 52546230 to 52640300 94070 - protein coding gene 3-hydroxyisobutyrate dehydrogenase
Tssr61036 6 52548863 to 52548886 23 - TSS region transcription start site region 61036
Gm44445 6 52560552 to 52563234 2682 + unclassified gene predicted gene, 44445
Gm33047 6 52565955 to 52579813 13858 - lncRNA gene predicted gene, 33047
Tssr56526 6 52570440 to 52570442 2 + TSS region transcription start site region 56526
Gm44434 6 52599501 to 52603245 3744 - unclassified gene predicted gene, 44434
Tssr61037 6 52620210 to 52620217 7 - TSS region transcription start site region 61037
Gm24355 6 52639234 to 52639355 121 - snoRNA gene predicted gene, 24355
Cpgi17449 6 52639890 to 52640612 722 CpG island CpG island 17449
Tssr61038 6 52640247 to 52640259 12 - TSS region transcription start site region 61038
Tssr61039 6 52640270 to 52640281 11 - TSS region transcription start site region 61039
Tssr61040 6 52640303 to 52640386 83 - TSS region transcription start site region 61040
Gm43966 6 52713344 to 52713955 611 - unclassified gene predicted gene, 43966
Cpgi17450 6 52713593 to 52714588 995 CpG island CpG island 17450
Tssr61041 6 52713617 to 52713626 9 - TSS region transcription start site region 61041
Tssr61042 6 52713627 to 52713639 12 - TSS region transcription start site region 61042
Tax1bp1 6 52713729 to 52766780 53051 + protein coding gene Tax1 (human T cell leukemia virus type I) binding protein 1
Tssr56527 6 52713731 to 52713800 69 + TSS region transcription start site region 56527
Tssr56528 6 52714003 to 52714049 46 + TSS region transcription start site region 56528
Tssr56529 6 52714050 to 52714078 28 + TSS region transcription start site region 56529
Tssr61043 6 52714330 to 52714349 19 - TSS region transcription start site region 61043
Tssr56530 6 52714412 to 52714440 28 + TSS region transcription start site region 56530
Tssr56531 6 52714445 to 52714467 22 + TSS region transcription start site region 56531
Tssr56532 6 52720319 to 52720324 5 + TSS region transcription start site region 56532
Tssr56533 6 52721366 to 52721379 13 + TSS region transcription start site region 56533
Tssr56534 6 52721394 to 52721428 34 + TSS region transcription start site region 56534
Gm43967 6 52722630 to 52722930 300 - pseudogene predicted gene, 43967
Tssr56535 6 52727192 to 52727230 38 + TSS region transcription start site region 56535
Tssr56536 6 52729331 to 52729370 39 + TSS region transcription start site region 56536
Tssr56537 6 52729412 to 52729445 33 + TSS region transcription start site region 56537
Tssr56538 6 52733184 to 52733199 15 + TSS region transcription start site region 56538
Tssr56539 6 52737077 to 52737111 34 + TSS region transcription start site region 56539
Tssr56540 6 52745695 to 52745698 3 + TSS region transcription start site region 56540
Jazf1 6 52768797 to 53068631 299834 - protein coding gene JAZF zinc finger 1
Tssr56541 6 52776133 to 52776145 12 + TSS region transcription start site region 56541
Tssr56542 6 52825840 to 52825859 19 + TSS region transcription start site region 56542
Gm15572 6 52843109 to 52843701 592 - pseudogene predicted gene 15572
Tssr61044 6 52866312 to 52866333 21 - TSS region transcription start site region 61044
Tssr1849 6 52866493 to 52866503 10 + TSS region transcription start site region 1849
Tssr1850 6 52902680 to 52902688 8 + TSS region transcription start site region 1850