Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52292451-52700085

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44294 6 52297124 to 52297851 727 + unclassified gene predicted gene, 44294
Cpgi17443 6 52305864 to 52306441 577 CpG island CpG island 17443
Evx1os 6 52308389 to 52314832 6443 - antisense lncRNA gene even skipped homeotic gene 1, opposite strand
Cpgi17444 6 52310330 to 52310851 521 CpG island CpG island 17444
Cpgi17445 6 52313329 to 52314881 1552 CpG island CpG island 17445
Tssr56521 6 52313430 to 52313445 15 + TSS region transcription start site region 56521
Evx1 6 52313498 to 52318378 4880 + protein coding gene even-skipped homeobox 1
Tssr61034 6 52313498 to 52313510 12 - TSS region transcription start site region 61034
Tssr56522 6 52313630 to 52313641 11 + TSS region transcription start site region 56522
Cpgi17446 6 52315638 to 52316054 416 CpG island CpG island 17446
Cpgi17447 6 52316156 to 52317690 1534 CpG island CpG island 17447
Cpgi17448 6 52321928 to 52322106 178 CpG island CpG island 17448
Gm8129 6 52346730 to 52346942 212 - pseudogene predicted pseudogene 8129
Tssr61035 6 52346997 to 52347004 7 - TSS region transcription start site region 61035
Gm15054 6 52357544 to 52357824 280 - pseudogene predicted gene 15054
Tssr56523 6 52368251 to 52368256 5 + TSS region transcription start site region 56523
D6Mit1004 6 52390970 to 52391092 122 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 1004
1700094M24Rik 6 52492451 to 52500085 7634 + lincRNA gene RIKEN cDNA 1700094M24 gene
Tssr56524 6 52492478 to 52492499 21 + TSS region transcription start site region 56524
Tssr56525 6 52492501 to 52492508 7 + TSS region transcription start site region 56525
Gm44028 6 52509889 to 52514036 4147 + lincRNA gene predicted gene, 44028
Hibadh 6 52546230 to 52640300 94070 - protein coding gene 3-hydroxyisobutyrate dehydrogenase
Tssr61036 6 52548863 to 52548886 23 - TSS region transcription start site region 61036
Gm44445 6 52560552 to 52563234 2682 + unclassified gene predicted gene, 44445
Gm33047 6 52565955 to 52579813 13858 - lncRNA gene predicted gene, 33047
Tssr56526 6 52570440 to 52570442 2 + TSS region transcription start site region 56526
Gm44434 6 52599501 to 52603245 3744 - unclassified gene predicted gene, 44434
Tssr61037 6 52620210 to 52620217 7 - TSS region transcription start site region 61037
Gm24355 6 52639234 to 52639355 121 - snoRNA gene predicted gene, 24355
Cpgi17449 6 52639890 to 52640612 722 CpG island CpG island 17449
Tssr61038 6 52640247 to 52640259 12 - TSS region transcription start site region 61038
Tssr61039 6 52640270 to 52640281 11 - TSS region transcription start site region 61039
Tssr61040 6 52640303 to 52640386 83 - TSS region transcription start site region 61040