Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52226197-52245854

Filter by:
38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxa9 6 52223097 to 52227370 4273 - protein coding gene homeobox A9
Cpgi17431 6 52225130 to 52226379 1249 CpG island CpG island 17431
Cpgi17432 6 52228984 to 52230890 1906 CpG island CpG island 17432
Tssr56513 6 52229895 to 52229916 21 + TSS region transcription start site region 56513
Tssr56514 6 52229971 to 52229980 9 + TSS region transcription start site region 56514
Tssr56515 6 52230009 to 52230024 15 + TSS region transcription start site region 56515
Tssr61013 6 52230080 to 52230095 15 - TSS region transcription start site region 61013
Mir196b 6 52230081 to 52230165 84 - miRNA gene microRNA 196b
Tssr61014 6 52230525 to 52230538 13 - TSS region transcription start site region 61014
Tssr61015 6 52230555 to 52230574 19 - TSS region transcription start site region 61015
Tssr61016 6 52230947 to 52230950 3 - TSS region transcription start site region 61016
Hoxa10 6 52231197 to 52240854 9657 - protein coding gene homeobox A10
Cpgi17433 6 52232477 to 52233014 537 CpG island CpG island 17433
Tssr61017 6 52233183 to 52233194 11 - TSS region transcription start site region 61017
Tssr61018 6 52233483 to 52233487 4 - TSS region transcription start site region 61018
Cpgi17434 6 52233588 to 52235164 1576 CpG island CpG island 17434
Tssr1845 6 52233988 to 52233996 8 - TSS region transcription start site region 1845
Tssr61019 6 52234226 to 52234237 11 - TSS region transcription start site region 61019
Tssr61020 6 52234817 to 52234825 8 - TSS region transcription start site region 61020
Tssr61021 6 52234881 to 52234894 13 - TSS region transcription start site region 61021
Tssr61022 6 52234902 to 52234960 58 - TSS region transcription start site region 61022
Tssr56516 6 52235120 to 52235127 7 + TSS region transcription start site region 56516
Cpgi17435 6 52240066 to 52240821 755 CpG island CpG island 17435
Tssr61023 6 52240468 to 52240501 33 - TSS region transcription start site region 61023
Tssr1846 6 52240638 to 52240643 5 - TSS region transcription start site region 1846
Tssr61024 6 52240657 to 52240668 11 - TSS region transcription start site region 61024
Tssr61025 6 52240669 to 52240683 14 - TSS region transcription start site region 61025
Tssr61026 6 52240761 to 52240768 7 - TSS region transcription start site region 61026
Tssr61027 6 52240841 to 52240854 13 - TSS region transcription start site region 61027
Tssr61028 6 52240859 to 52240874 15 - TSS region transcription start site region 61028
Hoxa11 6 52242106 to 52245810 3704 - protein coding gene homeobox A11
Cpgi17436 6 52244854 to 52246772 1918 CpG island CpG island 17436
Tssr56517 6 52245001 to 52245014 13 + TSS region transcription start site region 56517
Tssr56518 6 52245024 to 52245039 15 + TSS region transcription start site region 56518
Hoxa11os 6 52245243 to 52249769 4526 + lncRNA gene homeobox A11, opposite strand
Tssr61029 6 52245748 to 52245763 15 - TSS region transcription start site region 61029
Tssr61030 6 52245764 to 52245793 29 - TSS region transcription start site region 61030
Tssr61031 6 52245796 to 52245826 30 - TSS region transcription start site region 61031