Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52218097-52232370

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxa7 6 52215623 to 52218573 2950 - protein coding gene homeobox A7
Tssr61004 6 52218686 to 52218716 30 - TSS region transcription start site region 61004
Cpgi17429 6 52221290 to 52222117 827 CpG island CpG island 17429
Tssr61005 6 52221573 to 52221591 18 - TSS region transcription start site region 61005
Hoxa9 6 52223097 to 52227370 4273 - protein coding gene homeobox A9
Cpgi17430 6 52224325 to 52224507 182 CpG island CpG island 17430
Tssr61006 6 52224593 to 52224611 18 - TSS region transcription start site region 61006
Cpgi17431 6 52225130 to 52226379 1249 CpG island CpG island 17431
Tssr61007 6 52225216 to 52225231 15 - TSS region transcription start site region 61007
Tssr61008 6 52225237 to 52225256 19 - TSS region transcription start site region 61008
Tssr61009 6 52225822 to 52225864 42 - TSS region transcription start site region 61009
Tssr61010 6 52225945 to 52225956 11 - TSS region transcription start site region 61010
Tssr61011 6 52226145 to 52226162 17 - TSS region transcription start site region 61011
Tssr61012 6 52226165 to 52226196 31 - TSS region transcription start site region 61012
Cpgi17432 6 52228984 to 52230890 1906 CpG island CpG island 17432
Tssr56513 6 52229895 to 52229916 21 + TSS region transcription start site region 56513
Tssr56514 6 52229971 to 52229980 9 + TSS region transcription start site region 56514
Tssr56515 6 52230009 to 52230024 15 + TSS region transcription start site region 56515
Tssr61013 6 52230080 to 52230095 15 - TSS region transcription start site region 61013
Mir196b 6 52230081 to 52230165 84 - miRNA gene microRNA 196b
Tssr61014 6 52230525 to 52230538 13 - TSS region transcription start site region 61014
Tssr61015 6 52230555 to 52230574 19 - TSS region transcription start site region 61015
Tssr61016 6 52230947 to 52230950 3 - TSS region transcription start site region 61016
Hoxa10 6 52231197 to 52240854 9657 - protein coding gene homeobox A10