Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52191198-52211244

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxa4 6 52189687 to 52191703 2016 - protein coding gene homeobox A4
Cpgi17421 6 52190828 to 52192473 1645 CpG island CpG island 17421
Tssr60983 6 52191262 to 52191285 23 - TSS region transcription start site region 60983
Tssr60984 6 52191318 to 52191342 24 - TSS region transcription start site region 60984
Tssr60985 6 52191347 to 52191365 18 - TSS region transcription start site region 60985
Tssr60986 6 52191383 to 52191393 10 - TSS region transcription start site region 60986
Tssr60987 6 52191618 to 52191645 27 - TSS region transcription start site region 60987
Tssr60988 6 52191675 to 52191685 10 - TSS region transcription start site region 60988
Tssr60989 6 52191695 to 52191716 21 - TSS region transcription start site region 60989
Cpgi17422 6 52200316 to 52200635 319 CpG island CpG island 17422
Tssr60990 6 52200946 to 52200973 27 - TSS region transcription start site region 60990
Hoxaas3 6 52201124 to 52213597 12473 + antisense lncRNA gene Hoxa cluster antisense RNA 3
Tssr56510 6 52201198 to 52201244 46 + TSS region transcription start site region 56510
Hoxa5 6 52201754 to 52204587 2833 - protein coding gene homeobox A5
Cpgi17423 6 52203237 to 52204872 1635 CpG island CpG island 17423
Tssr60991 6 52204239 to 52204250 11 - TSS region transcription start site region 60991
Tssr60992 6 52204251 to 52204262 11 - TSS region transcription start site region 60992
Tssr60993 6 52204315 to 52204338 23 - TSS region transcription start site region 60993
Tssr60994 6 52204387 to 52204408 21 - TSS region transcription start site region 60994
Tssr60995 6 52204415 to 52204463 48 - TSS region transcription start site region 60995
Cpgi17424 6 52205644 to 52206728 1084 CpG island CpG island 17424
Hoxa6 6 52206365 to 52208624 2259 - protein coding gene homeobox A6
Cpgi17425 6 52208173 to 52209145 972 CpG island CpG island 17425
Tssr60996 6 52208595 to 52208604 9 - TSS region transcription start site region 60996
Tssr60997 6 52208645 to 52208678 33 - TSS region transcription start site region 60997
Tssr60998 6 52208694 to 52208705 11 - TSS region transcription start site region 60998