Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52167498-52190851

Filter by:
23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxaas2 6 52165674 to 52169451 3777 + lncRNA gene Hoxa cluster antisense RNA 2
Cpgi17415 6 52168592 to 52169076 484 CpG island CpG island 17415
Hoxa3 6 52169062 to 52213067 44005 - protein coding gene homeobox A3
Cpgi17416 6 52170010 to 52171067 1057 CpG island CpG island 17416
Cpgi17417 6 52172360 to 52172928 568 CpG island CpG island 17417
Tssr56504 6 52172810 to 52172825 15 + TSS region transcription start site region 56504
Tssr56505 6 52172875 to 52172887 12 + TSS region transcription start site region 56505
Gm15050 6 52172881 to 52174059 1178 + antisense lncRNA gene predicted gene 15050
Tssr56506 6 52172947 to 52172951 4 + TSS region transcription start site region 56506
Tssr56507 6 52175174 to 52175220 46 + TSS region transcription start site region 56507
Cpgi17418 6 52175193 to 52176195 1002 CpG island CpG island 17418
Tssr60979 6 52175955 to 52175995 40 - TSS region transcription start site region 60979
Tssr56508 6 52177152 to 52177156 4 + TSS region transcription start site region 56508
Cpgi17419 6 52177194 to 52177641 447 CpG island CpG island 17419
5730596B20Rik 6 52177498 to 52180851 3353 + protein coding gene RIKEN cDNA 5730596B20 gene
Gm29430 6 52183110 to 52189925 6815 + antisense lncRNA gene predicted gene 29430
Tssr60980 6 52183828 to 52183855 27 - TSS region transcription start site region 60980
Tssr60981 6 52184127 to 52184151 24 - TSS region transcription start site region 60981
Hoxa4 6 52189687 to 52191703 2016 - protein coding gene homeobox A4
Cpgi17420 6 52190414 to 52190691 277 CpG island CpG island 17420
Tssr56509 6 52190444 to 52190448 4 + TSS region transcription start site region 56509
Tssr60982 6 52190591 to 52190606 15 - TSS region transcription start site region 60982
Cpgi17421 6 52190828 to 52192473 1645 CpG island CpG island 17421