Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:52162360-52182928

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxa2 6 52162417 to 52164831 2414 - protein coding gene homeobox A2
Gm28308 6 52163359 to 52213339 49980 - protein coding gene predicted gene 28308
Cpgi17412 6 52164154 to 52164650 496 CpG island CpG island 17412
Tssr60975 6 52164448 to 52164464 16 - TSS region transcription start site region 60975
Tssr60976 6 52164473 to 52164490 17 - TSS region transcription start site region 60976
Tssr60977 6 52164538 to 52164549 11 - TSS region transcription start site region 60977
Tssr60978 6 52164822 to 52164829 7 - TSS region transcription start site region 60978
Cpgi17413 6 52165039 to 52165270 231 CpG island CpG island 17413
Cpgi17414 6 52165648 to 52166045 397 CpG island CpG island 17414
Hoxaas2 6 52165674 to 52169451 3777 + lncRNA gene Hoxa cluster antisense RNA 2
Tssr56502 6 52165703 to 52165715 12 + TSS region transcription start site region 56502
Gm46960 6 52166112 to 52166790 678 - lncRNA gene predicted gene, 46960
Tssr56503 6 52166517 to 52166524 7 + TSS region transcription start site region 56503
Cpgi17415 6 52168592 to 52169076 484 CpG island CpG island 17415
Hoxa3 6 52169062 to 52213067 44005 - protein coding gene homeobox A3
Cpgi17416 6 52170010 to 52171067 1057 CpG island CpG island 17416
Cpgi17417 6 52172360 to 52172928 568 CpG island CpG island 17417
Tssr56504 6 52172810 to 52172825 15 + TSS region transcription start site region 56504
Tssr56505 6 52172875 to 52172887 12 + TSS region transcription start site region 56505
Gm15050 6 52172881 to 52174059 1178 + antisense lncRNA gene predicted gene 15050
Tssr56506 6 52172947 to 52172951 4 + TSS region transcription start site region 56506
Tssr56507 6 52175174 to 52175220 46 + TSS region transcription start site region 56507
Cpgi17418 6 52175193 to 52176195 1002 CpG island CpG island 17418
Tssr60979 6 52175955 to 52175995 40 - TSS region transcription start site region 60979
Tssr56508 6 52177152 to 52177156 4 + TSS region transcription start site region 56508
Cpgi17419 6 52177194 to 52177641 447 CpG island CpG island 17419
5730596B20Rik 6 52177498 to 52180851 3353 + protein coding gene RIKEN cDNA 5730596B20 gene