Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:51476941-51886944

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cbx3 6 51470447 to 51483704 13257 + protein coding gene chromobox 3
Tssr56454 6 51477475 to 51477478 3 + TSS region transcription start site region 56454
Tssr56455 6 51482992 to 51483001 9 + TSS region transcription start site region 56455
Cpgi17403 6 51523709 to 51524783 1074 CpG island CpG island 17403
Snx10 6 51523902 to 51590679 66777 + protein coding gene sorting nexin 10
Tssr56456 6 51523924 to 51523941 17 + TSS region transcription start site region 56456
Tssr56457 6 51523945 to 51523976 31 + TSS region transcription start site region 56457
Tssr56458 6 51523979 to 51523997 18 + TSS region transcription start site region 56458
Tssr56459 6 51524728 to 51524743 15 + TSS region transcription start site region 56459
Tssr56460 6 51525512 to 51525516 4 + TSS region transcription start site region 56460
Tssr56461 6 51531373 to 51531377 4 + TSS region transcription start site region 56461
Tssr56462 6 51537429 to 51537436 7 + TSS region transcription start site region 56462
Tssr56463 6 51537437 to 51537475 38 + TSS region transcription start site region 56463
Tssr56464 6 51544477 to 51544480 3 + TSS region transcription start site region 56464
Tssr56465 6 51544513 to 51544578 65 + TSS region transcription start site region 56465
Tssr56466 6 51544587 to 51544609 22 + TSS region transcription start site region 56466
Tssr56467 6 51544621 to 51544630 9 + TSS region transcription start site region 56467
Tssr56468 6 51544650 to 51544661 11 + TSS region transcription start site region 56468
Tssr56469 6 51544667 to 51544687 20 + TSS region transcription start site region 56469
Tssr56470 6 51544691 to 51544706 15 + TSS region transcription start site region 56470
Tssr56471 6 51544714 to 51544732 18 + TSS region transcription start site region 56471
Tssr60950 6 51545282 to 51545322 40 - TSS region transcription start site region 60950
Tssr56472 6 51545507 to 51545529 22 + TSS region transcription start site region 56472
Tssr56473 6 51557514 to 51557544 30 + TSS region transcription start site region 56473
Tssr56474 6 51569946 to 51569995 49 + TSS region transcription start site region 56474
Tssr56475 6 51575786 to 51575804 18 + TSS region transcription start site region 56475
Tssr56476 6 51575811 to 51575818 7 + TSS region transcription start site region 56476
Tssr56477 6 51575827 to 51575839 12 + TSS region transcription start site region 56477
Tssr56478 6 51575870 to 51575892 22 + TSS region transcription start site region 56478
Tssr60951 6 51581670 to 51581712 42 - TSS region transcription start site region 60951
Tssr56479 6 51584322 to 51584333 11 + TSS region transcription start site region 56479
Tssr56480 6 51584487 to 51584507 20 + TSS region transcription start site region 56480
Tssr56481 6 51584525 to 51584543 18 + TSS region transcription start site region 56481
Tssr56482 6 51584626 to 51584637 11 + TSS region transcription start site region 56482
Tssr56483 6 51588206 to 51588216 10 + TSS region transcription start site region 56483
Tssr56484 6 51589077 to 51589094 17 + TSS region transcription start site region 56484
Tssr56485 6 51589353 to 51589395 42 + TSS region transcription start site region 56485
Tssr56486 6 51589997 to 51590000 3 + TSS region transcription start site region 56486
Tssr56487 6 51590777 to 51590782 5 + TSS region transcription start site region 56487
Tssr60952 6 51592288 to 51592314 26 - TSS region transcription start site region 60952
Cpgi17404 6 51592291 to 51593152 861 CpG island CpG island 17404
Tssr56488 6 51597625 to 51597638 13 + TSS region transcription start site region 56488
Tssr56489 6 51597739 to 51597753 14 + TSS region transcription start site region 56489
Tssr56490 6 51597759 to 51597771 12 + TSS region transcription start site region 56490
Tssr56491 6 51598917 to 51598930 13 + TSS region transcription start site region 56491
Tssr56492 6 51598932 to 51598961 29 + TSS region transcription start site region 56492
Cpgi17405 6 51612336 to 51613176 840 CpG island CpG island 17405
Cpgi17406 6 51613880 to 51614269 389 CpG island CpG island 17406
Gm22914 6 51621632 to 51621708 76 + miRNA gene predicted gene, 22914
Cpgi17407 6 51650068 to 51650263 195 CpG island CpG island 17407
Tssr60953 6 51681941 to 51681944 3 - TSS region transcription start site region 60953
Gm38811 6 51694970 to 51702031 7061 - lincRNA gene predicted gene, 38811
Tssr60954 6 51848676 to 51848681 5 - TSS region transcription start site region 60954
Skap2 6 51859165 to 52012549 153384 - protein coding gene src family associated phosphoprotein 2
Tssr60955 6 51864350 to 51864392 42 - TSS region transcription start site region 60955
Tssr60956 6 51871236 to 51871249 13 - TSS region transcription start site region 60956
Tssr60957 6 51873676 to 51873692 16 - TSS region transcription start site region 60957
Tssr60958 6 51873697 to 51873709 12 - TSS region transcription start site region 60958
Tssr60959 6 51881255 to 51881257 2 - TSS region transcription start site region 60959