Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:51332670-51558768

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
BC022713 6 51330493 to 51333705 3212 unclassified gene cDNA sequence BC022713
Tssr60934 6 51346752 to 51346774 22 - TSS region transcription start site region 60934
Cpgi17399 6 51379532 to 51380013 481 CpG island CpG island 17399
Gm26677 6 51379710 to 51392777 13067 - lincRNA gene predicted gene, 26677
Gm6559 6 51379710 to 51392791 13081 + lincRNA gene predicted gene 6559
0610033M10Rik 6 51400966 to 51402219 1253 - lincRNA gene RIKEN cDNA 0610033M10 gene
Cpgi17400 6 51422187 to 51422473 286 CpG island CpG island 17400
Cpgi17401 6 51432593 to 51433535 942 CpG island CpG island 17401
Tssr56435 6 51432663 to 51432674 11 + TSS region transcription start site region 56435
Nfe2l3 6 51432670 to 51458768 26098 + protein coding gene nuclear factor, erythroid derived 2, like 3
Tssr56436 6 51432678 to 51432784 106 + TSS region transcription start site region 56436
Tssr56437 6 51432823 to 51432834 11 + TSS region transcription start site region 56437
Hnrnpa2b1 6 51460932 to 51469894 8962 - protein coding gene heterogeneous nuclear ribonucleoprotein A2/B1
Tssr56438 6 51463424 to 51463461 37 + TSS region transcription start site region 56438
Tssr60935 6 51463483 to 51463499 16 - TSS region transcription start site region 60935
Tssr56439 6 51464418 to 51464429 11 + TSS region transcription start site region 56439
Tssr56440 6 51464438 to 51464448 10 + TSS region transcription start site region 56440
Tssr60936 6 51464446 to 51464450 4 - TSS region transcription start site region 60936
Tssr56441 6 51464450 to 51464460 10 + TSS region transcription start site region 56441
Tssr60937 6 51464453 to 51464471 18 - TSS region transcription start site region 60937
Tssr56442 6 51464466 to 51464512 46 + TSS region transcription start site region 56442
Tssr60938 6 51464495 to 51464515 20 - TSS region transcription start site region 60938
Tssr1843 6 51465177 to 51465201 24 + TSS region transcription start site region 1843
Tssr60939 6 51466219 to 51466225 6 - TSS region transcription start site region 60939
Tssr60940 6 51466377 to 51466404 27 - TSS region transcription start site region 60940
Tssr60941 6 51466622 to 51466688 66 - TSS region transcription start site region 60941
Tssr60942 6 51466831 to 51466835 4 - TSS region transcription start site region 60942
Tssr60943 6 51466929 to 51466945 16 - TSS region transcription start site region 60943
Tssr60944 6 51466951 to 51466992 41 - TSS region transcription start site region 60944
Tssr60945 6 51467819 to 51467821 2 - TSS region transcription start site region 60945
Tssr60946 6 51468451 to 51468469 18 - TSS region transcription start site region 60946
Cpgi17402 6 51468845 to 51471391 2546 CpG island CpG island 17402
Tssr56443 6 51469428 to 51469462 34 + TSS region transcription start site region 56443
Tssr60947 6 51469836 to 51469854 18 - TSS region transcription start site region 60947
Tssr60948 6 51469869 to 51469877 8 - TSS region transcription start site region 60948
Tssr56444 6 51470183 to 51470217 34 + TSS region transcription start site region 56444
Tssr56445 6 51470339 to 51470350 11 + TSS region transcription start site region 56445
Tssr56446 6 51470405 to 51470416 11 + TSS region transcription start site region 56446
Tssr56447 6 51470421 to 51470430 9 + TSS region transcription start site region 56447
Tssr56448 6 51470433 to 51470478 45 + TSS region transcription start site region 56448
Cbx3 6 51470447 to 51483704 13257 + protein coding gene chromobox 3
Tssr56449 6 51470494 to 51470497 3 + TSS region transcription start site region 56449
Tssr56450 6 51470510 to 51470528 18 + TSS region transcription start site region 56450
Tssr56451 6 51470547 to 51470561 14 + TSS region transcription start site region 56451
Tssr56452 6 51470608 to 51470620 12 + TSS region transcription start site region 56452
Tssr56453 6 51470633 to 51470673 40 + TSS region transcription start site region 56453
Tssr60949 6 51471029 to 51471069 40 - TSS region transcription start site region 60949
Tssr56454 6 51477475 to 51477478 3 + TSS region transcription start site region 56454
Tssr56455 6 51482992 to 51483001 9 + TSS region transcription start site region 56455
Cpgi17403 6 51523709 to 51524783 1074 CpG island CpG island 17403
Snx10 6 51523902 to 51590679 66777 + protein coding gene sorting nexin 10
Tssr56456 6 51523924 to 51523941 17 + TSS region transcription start site region 56456
Tssr56457 6 51523945 to 51523976 31 + TSS region transcription start site region 56457
Tssr56458 6 51523979 to 51523997 18 + TSS region transcription start site region 56458
Tssr56459 6 51524728 to 51524743 15 + TSS region transcription start site region 56459
Tssr56460 6 51525512 to 51525516 4 + TSS region transcription start site region 56460
Tssr56461 6 51531373 to 51531377 4 + TSS region transcription start site region 56461
Tssr56462 6 51537429 to 51537436 7 + TSS region transcription start site region 56462
Tssr56463 6 51537437 to 51537475 38 + TSS region transcription start site region 56463
Tssr56464 6 51544477 to 51544480 3 + TSS region transcription start site region 56464
Tssr56465 6 51544513 to 51544578 65 + TSS region transcription start site region 56465
Tssr56466 6 51544587 to 51544609 22 + TSS region transcription start site region 56466
Tssr56467 6 51544621 to 51544630 9 + TSS region transcription start site region 56467
Tssr56468 6 51544650 to 51544661 11 + TSS region transcription start site region 56468
Tssr56469 6 51544667 to 51544687 20 + TSS region transcription start site region 56469
Tssr56470 6 51544691 to 51544706 15 + TSS region transcription start site region 56470
Tssr56471 6 51544714 to 51544732 18 + TSS region transcription start site region 56471
Tssr60950 6 51545282 to 51545322 40 - TSS region transcription start site region 60950
Tssr56472 6 51545507 to 51545529 22 + TSS region transcription start site region 56472
Tssr56473 6 51557514 to 51557544 30 + TSS region transcription start site region 56473