Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:50670003-51209382

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38808 6 50659851 to 50679483 19632 - lncRNA gene predicted gene, 38808
D6Mit276 6 50713385 to 50713499 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 276
Gm3017 6 50746687 to 50747812 1125 - pseudogene predicted gene 3017
C530044C16Rik 6 50776115 to 50814894 38779 + lincRNA gene RIKEN cDNA C530044C16 gene
Gm44109 6 50799072 to 50803031 3959 - lincRNA gene predicted gene, 44109
Gm31455 6 50804265 to 50822292 18027 - lncRNA gene predicted gene, 31455
G930045G22Rik 6 50846713 to 50878077 31364 - lincRNA gene RIKEN cDNA G930045G22 gene
D6Mit119 6 50864934 to 50865047 113 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 119
Hdlk 6 50864934 to 55556043 4691109 heritable phenotypic marker hypodactyly like
Gm45922 6 50880887 to 50882620 1733 - lncRNA gene predicted gene, 45922
Cpgi17394 6 50890859 to 50891081 222 CpG island CpG island 17394
Tssr56425 6 50891297 to 50891305 8 + TSS region transcription start site region 56425
Mom12 6 50895281 to 50895420 139 QTL Modifier of Min 12
D6Mit33 6 50895281 to 50895420 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 33
Lxw2 6 50895281 to 50895420 139 QTL lupus BXSB x NZW 2
Gm31631 6 50900455 to 50908977 8522 - lncRNA gene predicted gene, 31631
Gm31579 6 50909770 to 50910735 965 + lncRNA gene predicted gene, 31579
Gm31686 6 50935003 to 50944382 9379 - lncRNA gene predicted gene, 31686
Gm44402 6 50967268 to 50967505 237 + pseudogene predicted gene, 44402
Gm38809 6 50973384 to 50990371 16987 - lncRNA gene predicted gene, 38809
Gm46959 6 50987400 to 51068011 80611 + lncRNA gene predicted gene, 46959
Gm31746 6 51032935 to 51061257 28322 - lncRNA gene predicted gene, 31746
Tssr60926 6 51059702 to 51059745 43 - TSS region transcription start site region 60926
D6Mit240 6 51077549 to 51077653 104 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 240
D6Mit240.1 6 51077688 to 51077801 113 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 240.1
Gm32190 6 51096515 to 51100672 4157 - lncRNA gene predicted gene, 32190
Gm32328 6 51124747 to 51166446 41699 - lncRNA gene predicted gene, 32328
Gm32246 6 51142007 to 51146083 4076 + lncRNA gene predicted gene, 32246
Gm38810 6 51154278 to 51154934 656 + lncRNA gene predicted gene, 38810
D6Mit275 6 51162079 to 51162203 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 275
D6Dcr9 6 51162097 to 51162200 103 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 9
Cpgi17395 6 51168742 to 51169197 455 CpG island CpG island 17395
Cpgi17396 6 51170109 to 51170340 231 CpG island CpG island 17396
Tssr56426 6 51171201 to 51171215 14 + TSS region transcription start site region 56426
Cpgi17397 6 51178562 to 51178782 220 CpG island CpG island 17397
Gm32403 6 51200919 to 51207351 6432 - lncRNA gene predicted gene, 32403
Sndy1 6 145656013 to 50864934 -94791079 heritable phenotypic marker syndactyly 1