MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:50584438-50724448

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
5430402O13Rik	6	50566643 to 50594865	28222	+	antisense lncRNA gene	RIKEN cDNA 5430402O13 gene
4921507P07Rik	6	50573302 to 50596632	23330	-	protein coding gene	RIKEN cDNA 4921507P07 gene
Cpgi17393	6	50596260 to 50597094	834		CpG island	CpG island 17393
Tssr60921	6	50596564 to 50596573	9	-	TSS region	transcription start site region 60921
Tssr60922	6	50596578 to 50596612	34	-	TSS region	transcription start site region 60922
Tssr60923	6	50596624 to 50596639	15	-	TSS region	transcription start site region 60923
Gm44054	6	50599869 to 50600240	371	+	pseudogene	predicted gene, 44054
Gm38807	6	50601538 to 50605277	3739	-	lncRNA gene	predicted gene, 38807
Tssr56424	6	50608420 to 50608428	8	+	TSS region	transcription start site region 56424
Gm4782	6	50608637 to 50610682	2045	+	pseudogene	predicted gene 4782
Gm8035	6	50617849 to 50618535	686	-	pseudogene	predicted gene 8035
Gm8038	6	50619841 to 50621884	2043	-	pseudogene	predicted gene 8038
Gm8039	6	50625745 to 50626456	711	-	pseudogene	predicted gene 8039
Gm18765	6	50627680 to 50628339	659	-	pseudogene	predicted gene, 18765
Tssr60924	6	50631123 to 50631125	2	-	TSS region	transcription start site region 60924
Npvf	6	50650871 to 50654393	3522	-	protein coding gene	neuropeptide VF precursor
Tssr60925	6	50654438 to 50654448	10	-	TSS region	transcription start site region 60925
Gm38808	6	50659851 to 50679483	19632	-	lncRNA gene	predicted gene, 38808
D6Mit276	6	50713385 to 50713499	114		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 276