Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:49468674-50178686

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stk31 6 49395604 to 49469501 73897 + protein coding gene serine threonine kinase 31
Tssr56403 6 49481536 to 49481540 4 + TSS region transcription start site region 56403
Gm5305 6 49542982 to 49543727 745 - pseudogene predicted gene 5305
Tssr60892 6 49543768 to 49543770 2 - TSS region transcription start site region 60892
Tssr56404 6 49586819 to 49586842 23 + TSS region transcription start site region 56404
Tssr56405 6 49586961 to 49586982 21 + TSS region transcription start site region 56405
Rpl19-ps8 6 49596241 to 49599764 3523 + pseudogene ribosomal protein L19, pseudogene 8
Gm31226 6 49633631 to 49678455 44824 + lncRNA gene predicted gene, 31226
V25Dq5 6 49700000 to 49700000 0 QTL vitamin D inactive form serum level QTL 5
Gm44219 6 49727251 to 49727523 272 - pseudogene predicted gene, 44219
Tssr60893 6 49733491 to 49733500 9 - TSS region transcription start site region 60893
Cpgi17387 6 49822030 to 49823005 975 CpG island CpG island 17387
Npy 6 49822710 to 49829507 6797 + protein coding gene neuropeptide Y
Tssr56406 6 49822711 to 49822727 16 + TSS region transcription start site region 56406
Tssr56407 6 49823615 to 49823629 14 + TSS region transcription start site region 56407
Cpgi17388 6 49823649 to 49823822 173 CpG island CpG island 17388
Tssr56408 6 49823674 to 49823686 12 + TSS region transcription start site region 56408
Tssr56409 6 49823731 to 49823740 9 + TSS region transcription start site region 56409
Tssr56410 6 49823753 to 49823762 9 + TSS region transcription start site region 56410
Tssr56411 6 49827537 to 49827546 9 + TSS region transcription start site region 56411
Tssr60894 6 49829499 to 49829508 9 - TSS region transcription start site region 60894
Gm18007 6 49858003 to 49858846 843 - pseudogene predicted gene, 18007
Tssr60895 6 49867767 to 49867773 6 - TSS region transcription start site region 60895
Tssr60896 6 49882070 to 49882074 4 - TSS region transcription start site region 60896
Gm3455 6 50051186 to 50107628 56442 + lincRNA gene predicted gene 3455
Gm38805 6 50107655 to 50110157 2502 - lncRNA gene predicted gene, 38805
Cpgi17389 6 50109367 to 50111032 1665 CpG island CpG island 17389
Tssr56412 6 50110186 to 50110295 109 + TSS region transcription start site region 56412
Mpp6 6 50110241 to 50198598 88357 + protein coding gene membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
Tssr56413 6 50110837 to 50110888 51 + TSS region transcription start site region 56413
Tssr56414 6 50110894 to 50110926 32 + TSS region transcription start site region 56414
Tssr56415 6 50125301 to 50125305 4 + TSS region transcription start site region 56415
Tssr56416 6 50133297 to 50133321 24 + TSS region transcription start site region 56416
Tssr56417 6 50144687 to 50144698 11 + TSS region transcription start site region 56417
Tssr56418 6 50144727 to 50144748 21 + TSS region transcription start site region 56418