Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:48843009-48963020

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem176a 6 48841483 to 48845364 3881 + protein coding gene transmembrane protein 176A
Tssr56223 6 48843949 to 48844015 66 + TSS region transcription start site region 56223
Tssr56224 6 48844084 to 48844113 29 + TSS region transcription start site region 56224
Tssr56225 6 48845126 to 48845157 31 + TSS region transcription start site region 56225
Tssr56226 6 48845158 to 48845177 19 + TSS region transcription start site region 56226
Tssr56227 6 48845198 to 48845242 44 + TSS region transcription start site region 56227
Tssr56228 6 48845962 to 48845985 23 + TSS region transcription start site region 56228
Tssr56229 6 48846034 to 48846052 18 + TSS region transcription start site region 56229
Tssr56230 6 48846104 to 48846115 11 + TSS region transcription start site region 56230
Gm44764 6 48847659 to 48863107 15448 - lncRNA gene predicted gene 44764
Cpgi17378 6 48852283 to 48852488 205 CpG island CpG island 17378
Gm7932 6 48859900 to 48865077 5177 + lincRNA gene predicted gene 7932
Tssr56231 6 48860316 to 48860338 22 + TSS region transcription start site region 56231
Tssr56232 6 48860339 to 48860358 19 + TSS region transcription start site region 56232
Tssr56233 6 48860379 to 48860405 26 + TSS region transcription start site region 56233
Tssr56234 6 48872836 to 48872860 24 + TSS region transcription start site region 56234
Tssr56235 6 48872871 to 48872885 14 + TSS region transcription start site region 56235
Tssr56236 6 48872943 to 48872954 11 + TSS region transcription start site region 56236
Tssr56237 6 48874181 to 48874192 11 + TSS region transcription start site region 56237
Tssr56238 6 48874794 to 48874809 15 + TSS region transcription start site region 56238
Tssr56239 6 48874833 to 48874842 9 + TSS region transcription start site region 56239
Tssr56240 6 48895214 to 48895233 19 + TSS region transcription start site region 56240
Tssr56241 6 48895243 to 48895264 21 + TSS region transcription start site region 56241
Aoc1 6 48895255 to 48909187 13932 + protein coding gene amine oxidase, copper-containing 1
Tssr60821 6 48902986 to 48903006 20 - TSS region transcription start site region 60821
Tssr60822 6 48903009 to 48903020 11 - TSS region transcription start site region 60822
Tssr56242 6 48904960 to 48904973 13 + TSS region transcription start site region 56242
Tssr56243 6 48904979 to 48904991 12 + TSS region transcription start site region 56243
Tssr56244 6 48905133 to 48905143 10 + TSS region transcription start site region 56244
Cpgi17379 6 48905633 to 48905831 198 CpG island CpG island 17379
Tssr56245 6 48906082 to 48906093 11 + TSS region transcription start site region 56245
Tssr56246 6 48906095 to 48906112 17 + TSS region transcription start site region 56246
Tssr56247 6 48906156 to 48906167 11 + TSS region transcription start site region 56247
Tssr56248 6 48906534 to 48906546 12 + TSS region transcription start site region 56248
Tssr56249 6 48907665 to 48907668 3 + TSS region transcription start site region 56249
Tssr56250 6 48907676 to 48907681 5 + TSS region transcription start site region 56250
Tssr56251 6 48907707 to 48907716 9 + TSS region transcription start site region 56251
Tssr56252 6 48907728 to 48907755 27 + TSS region transcription start site region 56252
Tssr56253 6 48907797 to 48907806 9 + TSS region transcription start site region 56253
Tssr56254 6 48907812 to 48907821 9 + TSS region transcription start site region 56254
Tssr56255 6 48908835 to 48908845 10 + TSS region transcription start site region 56255
Tssr56256 6 48908847 to 48908869 22 + TSS region transcription start site region 56256
D6Mit313 6 48909196 to 48909311 115 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 313
Tssr56257 6 48929891 to 48929897 6 + TSS region transcription start site region 56257
1600015I10Rik 6 48929896 to 48933687 3791 + protein coding gene RIKEN cDNA 1600015I10 gene
Gm24348 6 48934794 to 48934923 129 + snoRNA gene predicted gene, 24348
Gm10242 6 48939798 to 48940127 329 - pseudogene predicted gene 10242
Tssr60823 6 48940180 to 48940183 3 - TSS region transcription start site region 60823
Tssr60824 6 48948881 to 48948888 7 - TSS region transcription start site region 60824
Tssr60825 6 48951454 to 48951458 4 - TSS region transcription start site region 60825
Tssr60826 6 48951510 to 48951527 17 - TSS region transcription start site region 60826
Tssr56258 6 48951869 to 48951875 6 + TSS region transcription start site region 56258
Gm18538 6 48956358 to 48956841 483 + pseudogene predicted gene, 18538
Gm19172 6 48962883 to 48964128 1245 + pseudogene predicted gene, 19172