Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:48842384-49252415

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278 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem176a 6 48841483 to 48845364 3881 + protein coding gene transmembrane protein 176A
Tssr56221 6 48842624 to 48842638 14 + TSS region transcription start site region 56221
Tssr56222 6 48842669 to 48842680 11 + TSS region transcription start site region 56222
Tssr56223 6 48843949 to 48844015 66 + TSS region transcription start site region 56223
Tssr56224 6 48844084 to 48844113 29 + TSS region transcription start site region 56224
Tssr56225 6 48845126 to 48845157 31 + TSS region transcription start site region 56225
Tssr56226 6 48845158 to 48845177 19 + TSS region transcription start site region 56226
Tssr56227 6 48845198 to 48845242 44 + TSS region transcription start site region 56227
Tssr56228 6 48845962 to 48845985 23 + TSS region transcription start site region 56228
Tssr56229 6 48846034 to 48846052 18 + TSS region transcription start site region 56229
Tssr56230 6 48846104 to 48846115 11 + TSS region transcription start site region 56230
Gm44764 6 48847659 to 48863107 15448 - lncRNA gene predicted gene 44764
Cpgi17378 6 48852283 to 48852488 205 CpG island CpG island 17378
Gm7932 6 48859900 to 48865077 5177 + lincRNA gene predicted gene 7932
Tssr56231 6 48860316 to 48860338 22 + TSS region transcription start site region 56231
Tssr56232 6 48860339 to 48860358 19 + TSS region transcription start site region 56232
Tssr56233 6 48860379 to 48860405 26 + TSS region transcription start site region 56233
Tssr56234 6 48872836 to 48872860 24 + TSS region transcription start site region 56234
Tssr56235 6 48872871 to 48872885 14 + TSS region transcription start site region 56235
Tssr56236 6 48872943 to 48872954 11 + TSS region transcription start site region 56236
Tssr56237 6 48874181 to 48874192 11 + TSS region transcription start site region 56237
Tssr56238 6 48874794 to 48874809 15 + TSS region transcription start site region 56238
Tssr56239 6 48874833 to 48874842 9 + TSS region transcription start site region 56239
Tssr56240 6 48895214 to 48895233 19 + TSS region transcription start site region 56240
Tssr56241 6 48895243 to 48895264 21 + TSS region transcription start site region 56241
Aoc1 6 48895255 to 48909187 13932 + protein coding gene amine oxidase, copper-containing 1
Tssr60821 6 48902986 to 48903006 20 - TSS region transcription start site region 60821
Tssr60822 6 48903009 to 48903020 11 - TSS region transcription start site region 60822
Tssr56242 6 48904960 to 48904973 13 + TSS region transcription start site region 56242
Tssr56243 6 48904979 to 48904991 12 + TSS region transcription start site region 56243
Tssr56244 6 48905133 to 48905143 10 + TSS region transcription start site region 56244
Cpgi17379 6 48905633 to 48905831 198 CpG island CpG island 17379
Tssr56245 6 48906082 to 48906093 11 + TSS region transcription start site region 56245
Tssr56246 6 48906095 to 48906112 17 + TSS region transcription start site region 56246
Tssr56247 6 48906156 to 48906167 11 + TSS region transcription start site region 56247
Tssr56248 6 48906534 to 48906546 12 + TSS region transcription start site region 56248
Tssr56249 6 48907665 to 48907668 3 + TSS region transcription start site region 56249
Tssr56250 6 48907676 to 48907681 5 + TSS region transcription start site region 56250
Tssr56251 6 48907707 to 48907716 9 + TSS region transcription start site region 56251
Tssr56252 6 48907728 to 48907755 27 + TSS region transcription start site region 56252
Tssr56253 6 48907797 to 48907806 9 + TSS region transcription start site region 56253
Tssr56254 6 48907812 to 48907821 9 + TSS region transcription start site region 56254
Tssr56255 6 48908835 to 48908845 10 + TSS region transcription start site region 56255
Tssr56256 6 48908847 to 48908869 22 + TSS region transcription start site region 56256
D6Mit313 6 48909196 to 48909311 115 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 313
Tssr56257 6 48929891 to 48929897 6 + TSS region transcription start site region 56257
1600015I10Rik 6 48929896 to 48933687 3791 + protein coding gene RIKEN cDNA 1600015I10 gene
Gm24348 6 48934794 to 48934923 129 + snoRNA gene predicted gene, 24348
Gm10242 6 48939798 to 48940127 329 - pseudogene predicted gene 10242
Tssr60823 6 48940180 to 48940183 3 - TSS region transcription start site region 60823
Tssr60824 6 48948881 to 48948888 7 - TSS region transcription start site region 60824
Tssr60825 6 48951454 to 48951458 4 - TSS region transcription start site region 60825
Tssr60826 6 48951510 to 48951527 17 - TSS region transcription start site region 60826
Tssr56258 6 48951869 to 48951875 6 + TSS region transcription start site region 56258
Gm18538 6 48956358 to 48956841 483 + pseudogene predicted gene, 18538
Gm19172 6 48962883 to 48964128 1245 + pseudogene predicted gene, 19172
Tssr56259 6 48974933 to 48974960 27 + TSS region transcription start site region 56259
Doxl2 6 48974963 to 48978746 3783 + protein coding gene diamine oxidase-like protein 2
Tssr60827 6 48976599 to 48976623 24 - TSS region transcription start site region 60827
Tssr56260 6 48977142 to 48977148 6 + TSS region transcription start site region 56260
Tssr56261 6 48977158 to 48977163 5 + TSS region transcription start site region 56261
Tssr56262 6 48977231 to 48977274 43 + TSS region transcription start site region 56262
Gm18539 6 48981120 to 48982209 1089 + pseudogene predicted gene, 18539
4930563H07Rik 6 48986616 to 48999616 13000 - antisense lncRNA gene RIKEN cDNA 4930563H07 gene
Svs1 6 48986861 to 48991722 4861 + protein coding gene seminal vesicle secretory protein 1
Tssr56263 6 48986896 to 48986912 16 + TSS region transcription start site region 56263
Tssr60828 6 48987334 to 48987340 6 - TSS region transcription start site region 60828
Tssr60829 6 48987426 to 48987435 9 - TSS region transcription start site region 60829
Tssr60830 6 48987444 to 48987448 4 - TSS region transcription start site region 60830
Tssr60831 6 48987459 to 48987462 3 - TSS region transcription start site region 60831
Tssr60832 6 48987716 to 48987721 5 - TSS region transcription start site region 60832
Tssr60833 6 48987731 to 48987741 10 - TSS region transcription start site region 60833
Tssr56264 6 48987845 to 48987855 10 + TSS region transcription start site region 56264
Tssr56265 6 48987858 to 48987872 14 + TSS region transcription start site region 56265
Tssr56266 6 48987887 to 48987896 9 + TSS region transcription start site region 56266
Tssr60834 6 48987934 to 48987946 12 - TSS region transcription start site region 60834
Tssr56267 6 48987949 to 48987967 18 + TSS region transcription start site region 56267
Tssr56268 6 48987969 to 48987976 7 + TSS region transcription start site region 56268
Tssr60835 6 48987980 to 48987989 9 - TSS region transcription start site region 60835
Tssr56269 6 48988002 to 48988011 9 + TSS region transcription start site region 56269
Tssr56270 6 48988028 to 48988039 11 + TSS region transcription start site region 56270
Tssr56271 6 48988061 to 48988070 9 + TSS region transcription start site region 56271
Tssr60836 6 48988063 to 48988076 13 - TSS region transcription start site region 60836
Tssr1834 6 48988072 to 48988084 12 + TSS region transcription start site region 1834
Tssr56272 6 48988114 to 48988123 9 + TSS region transcription start site region 56272
Tssr56273 6 48988168 to 48988177 9 + TSS region transcription start site region 56273
Tssr60837 6 48988168 to 48988174 6 - TSS region transcription start site region 60837
Tssr1835 6 48988191 to 48988196 5 + TSS region transcription start site region 1835
Tssr56274 6 48988245 to 48988253 8 + TSS region transcription start site region 56274
Tssr56275 6 48988273 to 48988286 13 + TSS region transcription start site region 56275
Tssr56276 6 48988293 to 48988308 15 + TSS region transcription start site region 56276
Tssr1836 6 48988381 to 48988384 3 + TSS region transcription start site region 1836
Tssr60838 6 48988482 to 48988532 50 - TSS region transcription start site region 60838
Tssr56277 6 48988504 to 48988507 3 + TSS region transcription start site region 56277
Tssr56278 6 48988508 to 48988527 19 + TSS region transcription start site region 56278
Tssr1837 6 48988535 to 48988536 1 + TSS region transcription start site region 1837
Tssr56279 6 48988546 to 48988547 1 + TSS region transcription start site region 56279
Tssr56280 6 48988573 to 48988580 7 + TSS region transcription start site region 56280
Tssr56281 6 48988624 to 48988631 7 + TSS region transcription start site region 56281
Tssr1838 6 48988657 to 48988660 3 + TSS region transcription start site region 1838
Tssr56282 6 48988763 to 48988773 10 + TSS region transcription start site region 56282
Tssr56283 6 48988794 to 48988807 13 + TSS region transcription start site region 56283
Tssr56284 6 48988818 to 48988819 1 + TSS region transcription start site region 56284
Tssr56285 6 48988848 to 48988858 10 + TSS region transcription start site region 56285
Tssr56286 6 48988887 to 48988899 12 + TSS region transcription start site region 56286
Tssr1839 6 48990171 to 48990173 2 + TSS region transcription start site region 1839
Tssr56287 6 48990183 to 48990200 17 + TSS region transcription start site region 56287
Tssr56288 6 48990202 to 48990216 14 + TSS region transcription start site region 56288
Tssr56289 6 48990225 to 48990238 13 + TSS region transcription start site region 56289
Tssr60839 6 48990235 to 48990242 7 - TSS region transcription start site region 60839
Gm19173 6 48995224 to 48997653 2429 + pseudogene predicted gene, 19173
Tssr56290 6 49022962 to 49022992 30 + TSS region transcription start site region 56290
Tssr56291 6 49033037 to 49033052 15 + TSS region transcription start site region 56291
Tssr56292 6 49033122 to 49033142 20 + TSS region transcription start site region 56292
Tssr56293 6 49035987 to 49036003 16 + TSS region transcription start site region 56293
Tssr56294 6 49036013 to 49036038 25 + TSS region transcription start site region 56294
Tssr56295 6 49036068 to 49036082 14 + TSS region transcription start site region 56295
Tssr60840 6 49036470 to 49036481 11 - TSS region transcription start site region 60840
Tssr56296 6 49036497 to 49036514 17 + TSS region transcription start site region 56296
Gpnmb 6 49036518 to 49058182 21664 + protein coding gene glycoprotein (transmembrane) nmb
Tssr56297 6 49036527 to 49036540 13 + TSS region transcription start site region 56297
Tssr56298 6 49036557 to 49036564 7 + TSS region transcription start site region 56298
Tssr56299 6 49036569 to 49036580 11 + TSS region transcription start site region 56299
Tssr56300 6 49036605 to 49036625 20 + TSS region transcription start site region 56300
Tssr56301 6 49036639 to 49036658 19 + TSS region transcription start site region 56301
Tssr56302 6 49036667 to 49036705 38 + TSS region transcription start site region 56302
Tssr56303 6 49036714 to 49036718 4 + TSS region transcription start site region 56303
Tssr56304 6 49038096 to 49038140 44 + TSS region transcription start site region 56304
Tssr56305 6 49038167 to 49038207 40 + TSS region transcription start site region 56305
Tssr56306 6 49038215 to 49038232 17 + TSS region transcription start site region 56306
Tssr56307 6 49038334 to 49038348 14 + TSS region transcription start site region 56307
Tssr60841 6 49038374 to 49038379 5 - TSS region transcription start site region 60841
Tssr56308 6 49039610 to 49039613 3 + TSS region transcription start site region 56308
Tssr56309 6 49039878 to 49039907 29 + TSS region transcription start site region 56309
Tssr56310 6 49040366 to 49040374 8 + TSS region transcription start site region 56310
Tssr56311 6 49040671 to 49040684 13 + TSS region transcription start site region 56311
Tssr56312 6 49040869 to 49040882 13 + TSS region transcription start site region 56312
Tssr56313 6 49042766 to 49042801 35 + TSS region transcription start site region 56313
Tssr60842 6 49042824 to 49042835 11 - TSS region transcription start site region 60842
Tssr60843 6 49042878 to 49042891 13 - TSS region transcription start site region 60843
Tssr56314 6 49042885 to 49042894 9 + TSS region transcription start site region 56314
Tssr60844 6 49042902 to 49042909 7 - TSS region transcription start site region 60844
Tssr56315 6 49043383 to 49043390 7 + TSS region transcription start site region 56315
Tssr56316 6 49043991 to 49044007 16 + TSS region transcription start site region 56316
Tssr56317 6 49044033 to 49044057 24 + TSS region transcription start site region 56317
Tssr56318 6 49044060 to 49044113 53 + TSS region transcription start site region 56318
Tssr60845 6 49044095 to 49044149 54 - TSS region transcription start site region 60845
Tssr56319 6 49045308 to 49045317 9 + TSS region transcription start site region 56319
Tssr56320 6 49045348 to 49045357 9 + TSS region transcription start site region 56320
Tssr60846 6 49045363 to 49045392 29 - TSS region transcription start site region 60846
Tssr56321 6 49045365 to 49045371 6 + TSS region transcription start site region 56321
Tssr56322 6 49045380 to 49045389 9 + TSS region transcription start site region 56322
Tssr56323 6 49045409 to 49045425 16 + TSS region transcription start site region 56323
Tssr60847 6 49045438 to 49045475 37 - TSS region transcription start site region 60847
Tssr56324 6 49045449 to 49045455 6 + TSS region transcription start site region 56324
Tssr56325 6 49045599 to 49045611 12 + TSS region transcription start site region 56325
Tssr56326 6 49045615 to 49045626 11 + TSS region transcription start site region 56326
Tssr56327 6 49045669 to 49045680 11 + TSS region transcription start site region 56327
Tssr56328 6 49045744 to 49045758 14 + TSS region transcription start site region 56328
Tssr56329 6 49045823 to 49045834 11 + TSS region transcription start site region 56329
Tssr56330 6 49045998 to 49046005 7 + TSS region transcription start site region 56330
Tssr56331 6 49046039 to 49046050 11 + TSS region transcription start site region 56331
Tssr56332 6 49046108 to 49046123 15 + TSS region transcription start site region 56332
Tssr56333 6 49046150 to 49046161 11 + TSS region transcription start site region 56333
Tssr56334 6 49046167 to 49046171 4 + TSS region transcription start site region 56334
Tssr56335 6 49046177 to 49046191 14 + TSS region transcription start site region 56335
Tssr56336 6 49046207 to 49046218 11 + TSS region transcription start site region 56336
Tssr56337 6 49046222 to 49046241 19 + TSS region transcription start site region 56337
D6Mit142 6 49046239 to 49046438 199 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 142
Tssr56338 6 49046245 to 49046257 12 + TSS region transcription start site region 56338
Tssr56339 6 49046258 to 49046271 13 + TSS region transcription start site region 56339
Tssr60848 6 49046335 to 49046408 73 - TSS region transcription start site region 60848
D6Dcr8 6 49046349 to 49046450 101 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 8
Tssr56340 6 49046450 to 49046461 11 + TSS region transcription start site region 56340
Tssr56341 6 49046710 to 49046721 11 + TSS region transcription start site region 56341
Tssr56342 6 49046742 to 49046753 11 + TSS region transcription start site region 56342
Tssr56343 6 49047292 to 49047299 7 + TSS region transcription start site region 56343
Tssr56344 6 49047306 to 49047323 17 + TSS region transcription start site region 56344
Tssr56345 6 49047324 to 49047342 18 + TSS region transcription start site region 56345
Tssr60849 6 49047329 to 49047362 33 - TSS region transcription start site region 60849
Tssr56346 6 49047361 to 49047395 34 + TSS region transcription start site region 56346
Tssr60850 6 49047384 to 49047415 31 - TSS region transcription start site region 60850
Tssr56347 6 49047399 to 49047413 14 + TSS region transcription start site region 56347
Tssr56348 6 49047425 to 49047436 11 + TSS region transcription start site region 56348
Tssr56349 6 49047748 to 49047757 9 + TSS region transcription start site region 56349
Tssr56350 6 49047775 to 49047786 11 + TSS region transcription start site region 56350
Tssr56351 6 49047805 to 49047813 8 + TSS region transcription start site region 56351
Tssr56352 6 49047818 to 49047832 14 + TSS region transcription start site region 56352
Tssr60851 6 49047854 to 49047877 23 - TSS region transcription start site region 60851
Tssr56353 6 49047887 to 49047900 13 + TSS region transcription start site region 56353
Tssr60852 6 49047897 to 49047906 9 - TSS region transcription start site region 60852
Tssr56354 6 49047902 to 49047914 12 + TSS region transcription start site region 56354
Tssr60853 6 49047907 to 49047918 11 - TSS region transcription start site region 60853
Tssr60854 6 49047926 to 49047935 9 - TSS region transcription start site region 60854
Tssr56355 6 49047927 to 49047938 11 + TSS region transcription start site region 56355
Tssr56356 6 49047945 to 49047956 11 + TSS region transcription start site region 56356
Tssr56357 6 49047957 to 49047968 11 + TSS region transcription start site region 56357
Tssr60855 6 49047959 to 49047980 21 - TSS region transcription start site region 60855
Tssr56358 6 49047975 to 49047986 11 + TSS region transcription start site region 56358
Tssr56359 6 49047990 to 49048017 27 + TSS region transcription start site region 56359