Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:48740982-48801010

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28053 6 48718607 to 48752644 34037 + protein coding gene predicted gene, 28053
Gimap1os 6 48738346 to 48741444 3098 - unclassified non-coding RNA gene GTPase, IMAP family member 1, opposite strand
Gimap1 6 48739054 to 48743795 4741 + protein coding gene GTPase, IMAP family member 1
Tssr60775 6 48741328 to 48741344 16 - TSS region transcription start site region 60775
Tssr60776 6 48741434 to 48741449 15 - TSS region transcription start site region 60776
Tssr60777 6 48741462 to 48741473 11 - TSS region transcription start site region 60777
Tssr60778 6 48742010 to 48742030 20 - TSS region transcription start site region 60778
Cpgi17377 6 48742563 to 48743289 726 CpG island CpG island 17377
Tssr60779 6 48746094 to 48746104 10 - TSS region transcription start site region 60779
Tssr56207 6 48746169 to 48746180 11 + TSS region transcription start site region 56207
Tssr56208 6 48746188 to 48746212 24 + TSS region transcription start site region 56208
Gimap5 6 48746197 to 48754210 8013 + protein coding gene GTPase, IMAP family member 5
Tssr56209 6 48746223 to 48746234 11 + TSS region transcription start site region 56209
Tssr56210 6 48746237 to 48746302 65 + TSS region transcription start site region 56210
Tssr56211 6 48746707 to 48746718 11 + TSS region transcription start site region 56211
Tssr60780 6 48747501 to 48747519 18 - TSS region transcription start site region 60780
Tssr60781 6 48747535 to 48747547 12 - TSS region transcription start site region 60781
Tssr1832 6 48747663 to 48747679 16 - TSS region transcription start site region 1832
Tssr60782 6 48747741 to 48747755 14 - TSS region transcription start site region 60782
Tssr56212 6 48747924 to 48747957 33 + TSS region transcription start site region 56212
Gm44226 6 48754230 to 48755986 1756 - lincRNA gene predicted gene, 44226
4833403J16Rik 6 48755338 to 48756368 1030 + lincRNA gene RIKEN cDNA 4833403J16 gene
Gimap3 6 48764464 to 48770851 6387 - protein coding gene GTPase, IMAP family member 3
Tssr56213 6 48768749 to 48768769 20 + TSS region transcription start site region 56213
Tssr60783 6 48770735 to 48770741 6 - TSS region transcription start site region 60783
Tssr60784 6 48770744 to 48770762 18 - TSS region transcription start site region 60784
Tssr60785 6 48770773 to 48770791 18 - TSS region transcription start site region 60785
Tssr60786 6 48770806 to 48770822 16 - TSS region transcription start site region 60786
Tssr60787 6 48770823 to 48770830 7 - TSS region transcription start site region 60787
Tssr60788 6 48770833 to 48770884 51 - TSS region transcription start site region 60788
Tssr60789 6 48770886 to 48770892 6 - TSS region transcription start site region 60789
Tssr56214 6 48770982 to 48771010 28 + TSS region transcription start site region 56214
Tssr56215 6 48771039 to 48771065 26 + TSS region transcription start site region 56215
Gm30714 6 48790997 to 48793777 2780 - lncRNA gene predicted gene, 30714
Gm30781 6 48798280 to 48798826 546 - lincRNA gene predicted gene, 30781