Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:48607234-48700875

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45021 6 48589610 to 48613250 23640 + protein coding gene predicted gene 45021
Gm44965 6 48593941 to 48619278 25337 + protein coding gene predicted gene 44965
Zfp775 6 48602063 to 48623227 21164 + protein coding gene zinc finger protein 775
Gm38804 6 48611273 to 48619218 7945 - antisense lncRNA gene predicted gene, 38804
Tssr60741 6 48613738 to 48613741 3 - TSS region transcription start site region 60741
Tssr60742 6 48613749 to 48613782 33 - TSS region transcription start site region 60742
Cpgi17374 6 48619566 to 48620850 1284 CpG island CpG island 17374
Cpgi17375 6 48626845 to 48627592 747 CpG island CpG island 17375
AI854703 6 48628167 to 48633688 5521 + protein coding gene expressed sequence AI854703
Cpgi17376 6 48628980 to 48630243 1263 CpG island CpG island 17376
D6Mit314 6 48635729 to 48635928 199 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 314
Tssr56151 6 48647208 to 48647219 11 + TSS region transcription start site region 56151
Tssr56152 6 48647224 to 48647298 74 + TSS region transcription start site region 56152
Gimap8 6 48647234 to 48660875 13641 + protein coding gene GTPase, IMAP family member 8
Tssr56153 6 48647309 to 48647318 9 + TSS region transcription start site region 56153
Tssr56154 6 48647322 to 48647327 5 + TSS region transcription start site region 56154
Tssr56155 6 48647388 to 48647404 16 + TSS region transcription start site region 56155
Tssr56156 6 48647412 to 48647423 11 + TSS region transcription start site region 56156
Tssr56157 6 48647424 to 48647437 13 + TSS region transcription start site region 56157
Tssr60743 6 48648085 to 48648090 5 - TSS region transcription start site region 60743
Tssr56158 6 48651772 to 48651775 3 + TSS region transcription start site region 56158
Tssr56159 6 48659456 to 48659466 10 + TSS region transcription start site region 56159
Gm44262 6 48665403 to 48665860 457 - pseudogene predicted gene, 44262
Tssr56160 6 48674799 to 48674833 34 + TSS region transcription start site region 56160
Tssr56161 6 48675201 to 48675209 8 + TSS region transcription start site region 56161
Gm46958 6 48675832 to 48676936 1104 - lncRNA gene predicted gene, 46958
Tssr56162 6 48676114 to 48676155 41 + TSS region transcription start site region 56162
Gimap9 6 48676129 to 48679114 2985 + protein coding gene GTPase, IMAP family member 9
Tssr56163 6 48676160 to 48676190 30 + TSS region transcription start site region 56163
Tssr56164 6 48676193 to 48676209 16 + TSS region transcription start site region 56164
Tssr56165 6 48676408 to 48676422 14 + TSS region transcription start site region 56165
Tssr56166 6 48677673 to 48677689 16 + TSS region transcription start site region 56166
Tssr60744 6 48680570 to 48680581 11 - TSS region transcription start site region 60744
Tssr56167 6 48680628 to 48680631 3 + TSS region transcription start site region 56167
Tssr60745 6 48681730 to 48681737 7 - TSS region transcription start site region 60745
Tssr60746 6 48681805 to 48681817 12 - TSS region transcription start site region 60746
Tssr56168 6 48681987 to 48681996 9 + TSS region transcription start site region 56168
Tssr60747 6 48682349 to 48682395 46 - TSS region transcription start site region 60747
Tssr56169 6 48682508 to 48682537 29 + TSS region transcription start site region 56169
Tssr60748 6 48684454 to 48684469 15 - TSS region transcription start site region 60748
Tssr56170 6 48684544 to 48684556 12 + TSS region transcription start site region 56170
Tssr56171 6 48684570 to 48684586 16 + TSS region transcription start site region 56171
Gimap4 6 48684578 to 48692062 7484 + protein coding gene GTPase, IMAP family member 4
Tssr56172 6 48684589 to 48684598 9 + TSS region transcription start site region 56172
Tssr56173 6 48685141 to 48685186 45 + TSS region transcription start site region 56173
Tssr56174 6 48685502 to 48685513 11 + TSS region transcription start site region 56174
Tssr56175 6 48685940 to 48685976 36 + TSS region transcription start site region 56175
Tssr56176 6 48686589 to 48686607 18 + TSS region transcription start site region 56176
Tssr60749 6 48687535 to 48687570 35 - TSS region transcription start site region 60749
Tssr56177 6 48687680 to 48687693 13 + TSS region transcription start site region 56177
Tssr60750 6 48689350 to 48689354 4 - TSS region transcription start site region 60750
Tssr56178 6 48690646 to 48690658 12 + TSS region transcription start site region 56178
Tssr56179 6 48690679 to 48690691 12 + TSS region transcription start site region 56179
Tssr56180 6 48691058 to 48691069 11 + TSS region transcription start site region 56180
Tssr56181 6 48691354 to 48691382 28 + TSS region transcription start site region 56181
Tssr1831 6 48699167 to 48699182 15 + TSS region transcription start site region 1831
Tssr56182 6 48700529 to 48700540 11 + TSS region transcription start site region 56182