Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 6:47948703-48148795

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30 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm6443 6 47953937 to 47954810 873 - pseudogene predicted gene 6443
n-TCgca57 6 47955931 to 47956002 71 + tRNA gene nuclear encoded tRNA cysteine 57 (anticodon GCA)
Cpgi17360 6 47993044 to 47993234 190 CpG island CpG island 17360
Zfp777 6 48001122 to 48025845 24723 - protein coding gene zinc finger protein 777
Cpgi17361 6 48001413 to 48002533 1120 CpG island CpG island 17361
Gm45738 6 48022482 to 48022889 407 - lncRNA gene predicted gene 45738
Cpgi17362 6 48024148 to 48026148 2000 CpG island CpG island 17362
Tssr60720 6 48025433 to 48025462 29 - TSS region transcription start site region 60720
Tssr60721 6 48025790 to 48025798 8 - TSS region transcription start site region 60721
Tssr60722 6 48025873 to 48025890 17 - TSS region transcription start site region 60722
Zfp746 6 48039329 to 48063527 24198 - protein coding gene zinc finger protein 746
Cpgi17363 6 48040752 to 48041423 671 CpG island CpG island 17363
Tssr60723 6 48041497 to 48041525 28 - TSS region transcription start site region 60723
Tssr56115 6 48042858 to 48042900 42 + TSS region transcription start site region 56115
Gt(pU21)138Imeg 6 48042885 to 48042984 99 + unclassified gene gene trap 138, Institute of Molecular Embryology and Genetics
Tssr56116 6 48050566 to 48050579 13 + TSS region transcription start site region 56116
Cpgi17364 6 48062332 to 48063891 1559 CpG island CpG island 17364
Tssr60724 6 48063464 to 48063592 128 - TSS region transcription start site region 60724
Gm30435 6 48107407 to 48123011 15604 + lncRNA gene predicted gene, 30435
Gm16630 6 48107840 to 48136214 28374 - lncRNA gene predicted gene, 16630
n-TCgca37 6 48110871 to 48110942 71 + tRNA gene nuclear encoded tRNA cysteine 37 (anticodon GCA)
n-TCgca10 6 48116444 to 48116515 71 - tRNA gene nuclear encoded tRNA cysteine 10 (anticodon GCA)
n-TCgca4 6 48117416 to 48117489 73 - tRNA gene nuclear encoded tRNA cysteine 4 (anticodon GCA)
n-TCgca13 6 48120290 to 48120361 71 + tRNA gene nuclear encoded tRNA cysteine 13 (anticodon GCA)
n-TCgca36 6 48121862 to 48121933 71 - tRNA gene nuclear encoded tRNA cysteine 36 (anticodon GCA)
n-TCgca38 6 48131648 to 48131719 71 + tRNA gene nuclear encoded tRNA cysteine 38 (anticodon GCA)
n-TCgca35 6 48133209 to 48133280 71 - tRNA gene nuclear encoded tRNA cysteine 35 (anticodon GCA)
n-TCgca39 6 48137113 to 48137184 71 + tRNA gene nuclear encoded tRNA cysteine 39 (anticodon GCA)
n-TCgca40 6 48141035 to 48141106 71 + tRNA gene nuclear encoded tRNA cysteine 40 (anticodon GCA)
D6Mit43 6 48141167 to 48141373 206 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 43