Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:47862003-48092876

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp398 6 47835661 to 47873537 37876 + protein coding gene zinc finger protein 398
Tssr56106 6 47869982 to 47869985 3 + TSS region transcription start site region 56106
Zfp282 6 47877209 to 47908485 31276 + protein coding gene zinc finger protein 282
Cpgi17355 6 47877320 to 47878437 1117 CpG island CpG island 17355
Tssr56107 6 47877548 to 47877569 21 + TSS region transcription start site region 56107
Tssr56108 6 47877571 to 47877594 23 + TSS region transcription start site region 56108
Tssr56109 6 47877620 to 47877640 20 + TSS region transcription start site region 56109
Tssr56110 6 47877643 to 47877708 65 + TSS region transcription start site region 56110
Cpgi17356 6 47904501 to 47905558 1057 CpG island CpG island 17356
Cpgi17357 6 47920285 to 47921228 943 CpG island CpG island 17357
Zfp212 6 47920568 to 47932639 12071 + protein coding gene Zinc finger protein 212
Tssr56111 6 47920584 to 47920636 52 + TSS region transcription start site region 56111
Cpgi17358 6 47942690 to 47943725 1035 CpG island CpG island 17358
Tssr56112 6 47943141 to 47943215 74 + TSS region transcription start site region 56112
Zfp783 6 47943175 to 47954549 11374 + pseudogene zinc finger protein 783
Cpgi17359 6 47953141 to 47953825 684 CpG island CpG island 17359
Tssr56113 6 47953390 to 47953451 61 + TSS region transcription start site region 56113
Zfp956 6 47953390 to 47965300 11910 + protein coding gene zinc finger protein 956
Tssr56114 6 47953458 to 47953468 10 + TSS region transcription start site region 56114
Gm6443 6 47977003 to 47977876 873 - pseudogene predicted gene 6443
n-TCgca57 6 47978997 to 47979068 71 + tRNA gene nuclear encoded tRNA cysteine 57 (anticodon GCA)
Cpgi17360 6 48016110 to 48016300 190 CpG island CpG island 17360
Zfp777 6 48024188 to 48048911 24723 - protein coding gene zinc finger protein 777
Cpgi17361 6 48024479 to 48025599 1120 CpG island CpG island 17361
Gm45738 6 48045548 to 48045955 407 - sense intronic lncRNA gene predicted gene 45738
Cpgi17362 6 48047214 to 48049214 2000 CpG island CpG island 17362
Tssr60720 6 48048499 to 48048528 29 - TSS region transcription start site region 60720
Gm24563 6 48048703 to 48048795 92 + miRNA gene predicted gene, 24563
Tssr60721 6 48048856 to 48048864 8 - TSS region transcription start site region 60721
Tssr60722 6 48048939 to 48048956 17 - TSS region transcription start site region 60722
Zfp746 6 48062395 to 48086593 24198 - protein coding gene zinc finger protein 746
Cpgi17363 6 48063818 to 48064489 671 CpG island CpG island 17363
Tssr60723 6 48064563 to 48064591 28 - TSS region transcription start site region 60723
Tssr56115 6 48065924 to 48065966 42 + TSS region transcription start site region 56115
Gt(pU21)138Imeg 6 48065950 to 48066049 99 unclassified gene gene trap 138, Institute of Molecular Embryology and Genetics
Tssr56116 6 48073632 to 48073645 13 + TSS region transcription start site region 56116
Cpgi17364 6 48085398 to 48086957 1559 CpG island CpG island 17364
Tssr60724 6 48086530 to 48086658 128 - TSS region transcription start site region 60724