Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:47573022-47787091

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ezh2 6 47530274 to 47595340 65066 - protein coding gene enhancer of zeste 2 polycomb repressive complex 2 subunit
D6Mit351 6 47574728 to 47574837 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 351
D430047D06Rik 6 47580282 to 47583708 3426 unclassified gene RIKEN cDNA D430047D06 gene
Tssr1830 6 47584175 to 47584182 7 - TSS region transcription start site region 1830
Gm44282 6 47585216 to 47585405 189 + pseudogene predicted gene, 44282
Cpgi17348 6 47594102 to 47595767 1665 CpG island CpG island 17348
Tssr60698 6 47594777 to 47594788 11 - TSS region transcription start site region 60698
Tssr60699 6 47594967 to 47595047 80 - TSS region transcription start site region 60699
Tssr60700 6 47595053 to 47595065 12 - TSS region transcription start site region 60700
Tssr56095 6 47595161 to 47595217 56 + TSS region transcription start site region 56095
F830010H11Rik 6 47595189 to 47597526 2337 unclassified gene RIKEN cDNA F830010H11 gene
Gm44141 6 47635297 to 47636879 1582 + unclassified gene predicted gene, 44141
Tssr56096 6 47636577 to 47636607 30 + TSS region transcription start site region 56096
Tssr60701 6 47636870 to 47636883 13 - TSS region transcription start site region 60701
Tssr60702 6 47636891 to 47636914 23 - TSS region transcription start site region 60702
Gm25283 6 47637143 to 47637219 76 + unclassified non-coding RNA gene predicted gene, 25283
Gm40371 6 47644607 to 47651846 7239 - lncRNA gene predicted gene, 40371
Cpgi17349 6 47650694 to 47651619 925 CpG island CpG island 17349
Gm40369 6 47652126 to 47656124 3998 + protein coding gene predicted gene, 40369
Rn4.5s 6 47654921 to 47655094 173 - rRNA gene 4.5S RNA
Gm40368 6 47656370 to 47660430 4060 + protein coding gene predicted gene, 40368
Gm40367 6 47660679 to 47664791 4112 + protein coding gene predicted gene, 40367
Gm36504 6 47665038 to 47669121 4083 + protein coding gene predicted gene, 36504
Gm40365 6 47669368 to 47673447 4079 + protein coding gene predicted gene, 40365
Gm36327 6 47673689 to 47677773 4084 + protein coding gene predicted gene, 36327
Gm40364 6 47678022 to 47682091 4069 + protein coding gene predicted gene, 40364
Gm40363 6 47682345 to 47738326 55981 + protein coding gene predicted gene, 40363
Cpgi17350 6 47740297 to 47740465 168 CpG island CpG island 17350
Gm36673 6 47762210 to 47773095 10885 + lncRNA gene predicted gene, 36673
Cpgi17351 6 47778200 to 47778748 548 CpG island CpG island 17351
Tssr60703 6 47778336 to 47778339 3 - TSS region transcription start site region 60703
Tssr60704 6 47780681 to 47780688 7 - TSS region transcription start site region 60704
Tssr56097 6 47781618 to 47781628 10 + TSS region transcription start site region 56097
Rny3 6 47781624 to 47781724 100 + scRNA gene RNA, Y3 small cytoplasmic (associated with Ro protein)
Tssr56098 6 47781639 to 47781678 39 + TSS region transcription start site region 56098
D6Mit315 6 47785022 to 47785116 94 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 315
Rpl31-ps7 6 47785996 to 47786374 378 - pseudogene ribosomal protein L31, pseudogene 7