Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:47470053-47720065

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cul1 6 47453737 to 47526139 72402 + protein coding gene cullin 1
Tssr56091 6 47480787 to 47480794 7 + TSS region transcription start site region 56091
Tssr56092 6 47510174 to 47510175 1 + TSS region transcription start site region 56092
Tssr56093 6 47522332 to 47522336 4 + TSS region transcription start site region 56093
Ezh2 6 47530274 to 47595340 65066 - protein coding gene enhancer of zeste 2 polycomb repressive complex 2 subunit
Tssr56094 6 47545696 to 47545716 20 + TSS region transcription start site region 56094
Gm26625 6 47546666 to 47551704 5038 + lincRNA gene predicted gene, 26625
Tssr60695 6 47550970 to 47550981 11 - TSS region transcription start site region 60695
Tssr60696 6 47556098 to 47556114 16 - TSS region transcription start site region 60696
Tssr60697 6 47563265 to 47563280 15 - TSS region transcription start site region 60697
D6Mit351 6 47574728 to 47574837 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 351
D430047D06Rik 6 47580282 to 47583708 3426 unclassified gene RIKEN cDNA D430047D06 gene
Tssr1830 6 47584175 to 47584182 7 - TSS region transcription start site region 1830
Gm44282 6 47585216 to 47585405 189 + pseudogene predicted gene, 44282
Cpgi17348 6 47594102 to 47595767 1665 CpG island CpG island 17348
Tssr60698 6 47594777 to 47594788 11 - TSS region transcription start site region 60698
Tssr60699 6 47594967 to 47595047 80 - TSS region transcription start site region 60699
Tssr60700 6 47595053 to 47595065 12 - TSS region transcription start site region 60700
Tssr56095 6 47595161 to 47595217 56 + TSS region transcription start site region 56095
F830010H11Rik 6 47595189 to 47597526 2337 unclassified gene RIKEN cDNA F830010H11 gene
Gm44141 6 47635297 to 47636879 1582 + unclassified gene predicted gene, 44141
Tssr56096 6 47636577 to 47636607 30 + TSS region transcription start site region 56096
Tssr60701 6 47636870 to 47636883 13 - TSS region transcription start site region 60701
Tssr60702 6 47636891 to 47636914 23 - TSS region transcription start site region 60702
Gm25283 6 47637143 to 47637219 76 + unclassified non-coding RNA gene predicted gene, 25283
Gm40371 6 47644607 to 47651846 7239 - lncRNA gene predicted gene, 40371
Cpgi17349 6 47650694 to 47651619 925 CpG island CpG island 17349
Gm40369 6 47652126 to 47656124 3998 + protein coding gene predicted gene, 40369
Rn4.5s 6 47654921 to 47655094 173 - rRNA gene 4.5S RNA
Gm40368 6 47656370 to 47660430 4060 + protein coding gene predicted gene, 40368
Gm40367 6 47660679 to 47664791 4112 + protein coding gene predicted gene, 40367
Gm36504 6 47665038 to 47669121 4083 + protein coding gene predicted gene, 36504
Gm40365 6 47669368 to 47673447 4079 + protein coding gene predicted gene, 40365
Gm36327 6 47673689 to 47677773 4084 + protein coding gene predicted gene, 36327
Gm40364 6 47678022 to 47682091 4069 + protein coding gene predicted gene, 40364
Gm40363 6 47682345 to 47738326 55981 + protein coding gene predicted gene, 40363