Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:4564215-4751370

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18289 6 4570879 to 4571728 849 - pseudogene predicted gene, 18289
Gm33959 6 4584345 to 4587092 2747 - lncRNA gene predicted gene, 33959
Gm26696 6 4593804 to 4596651 2847 - lincRNA gene predicted gene, 26696
Tssr54756 6 4600334 to 4600355 21 + TSS region transcription start site region 54756
Cpgi17125 6 4600451 to 4601782 1331 CpG island CpG island 17125
Tssr54757 6 4600658 to 4600676 18 + TSS region transcription start site region 54757
Tssr54758 6 4600732 to 4600770 38 + TSS region transcription start site region 54758
Casd1 6 4600839 to 4643355 42516 + protein coding gene CAS1 domain containing 1
Tssr54759 6 4600898 to 4600956 58 + TSS region transcription start site region 54759
Tssr54760 6 4601124 to 4601164 40 + TSS region transcription start site region 54760
Gm44432 6 4610234 to 4611171 937 + unclassified gene predicted gene, 44432
Tssr54761 6 4623902 to 4623916 14 + TSS region transcription start site region 54761
Tssr54762 6 4623955 to 4623973 18 + TSS region transcription start site region 54762
Gm38761 6 4654215 to 4661370 7155 + lncRNA gene predicted gene, 38761
Sgce 6 4674350 to 4747204 72854 - protein coding gene sarcoglycan, epsilon
Tssr59720 6 4717135 to 4717166 31 - TSS region transcription start site region 59720
Tssr59721 6 4717169 to 4717184 15 - TSS region transcription start site region 59721
Tssr59722 6 4717208 to 4717223 15 - TSS region transcription start site region 59722
Tssr59723 6 4736421 to 4736441 20 - TSS region transcription start site region 59723
Tssr59724 6 4746391 to 4746395 4 - TSS region transcription start site region 59724
Cpgi17126 6 4746791 to 4748791 2000 CpG island CpG island 17126
Tssr59725 6 4747018 to 4747030 12 - TSS region transcription start site region 59725
Tssr59726 6 4747045 to 4747056 11 - TSS region transcription start site region 59726
Tssr59727 6 4747066 to 4747132 66 - TSS region transcription start site region 59727
Tssr59728 6 4747170 to 4747184 14 - TSS region transcription start site region 59728
Tssr1771 6 4747298 to 4747354 56 + TSS region transcription start site region 1771
Peg10 6 4747306 to 4760517 13211 + protein coding gene paternally expressed 10
Tssr54763 6 4747360 to 4747372 12 + TSS region transcription start site region 54763
Tssr1772 6 4747431 to 4747441 10 + TSS region transcription start site region 1772
Tssr1773 6 4747442 to 4747452 10 + TSS region transcription start site region 1773
Tssr54764 6 4747610 to 4747613 3 + TSS region transcription start site region 54764