Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:4540234-4681171

Filter by:
32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col1a2 6 4505618 to 4541543 35925 + protein coding gene collagen, type I, alpha 2
Tssr54742 6 4540528 to 4540542 14 + TSS region transcription start site region 54742
Tssr54743 6 4540543 to 4540573 30 + TSS region transcription start site region 54743
Tssr54744 6 4540574 to 4540585 11 + TSS region transcription start site region 54744
Tssr54745 6 4540586 to 4540591 5 + TSS region transcription start site region 54745
Tssr54746 6 4540599 to 4540620 21 + TSS region transcription start site region 54746
Tssr54747 6 4540630 to 4540671 41 + TSS region transcription start site region 54747
Tssr54748 6 4540674 to 4540679 5 + TSS region transcription start site region 54748
Tssr59718 6 4540721 to 4540735 14 - TSS region transcription start site region 59718
Tssr59719 6 4540789 to 4540832 43 - TSS region transcription start site region 59719
Tssr54749 6 4540843 to 4540852 9 + TSS region transcription start site region 54749
Tssr54750 6 4540856 to 4540861 5 + TSS region transcription start site region 54750
Tssr54751 6 4540864 to 4540875 11 + TSS region transcription start site region 54751
Tssr54752 6 4540907 to 4540922 15 + TSS region transcription start site region 54752
Tssr54753 6 4540929 to 4540946 17 + TSS region transcription start site region 54753
Tssr54754 6 4541038 to 4541055 17 + TSS region transcription start site region 54754
Tssr54755 6 4541437 to 4541448 11 + TSS region transcription start site region 54755
Gm18289 6 4570879 to 4571728 849 - pseudogene predicted gene, 18289
Gm33959 6 4584345 to 4587092 2747 - lncRNA gene predicted gene, 33959
Gm26696 6 4593804 to 4596651 2847 - lincRNA gene predicted gene, 26696
Tssr54756 6 4600334 to 4600355 21 + TSS region transcription start site region 54756
Cpgi17125 6 4600451 to 4601782 1331 CpG island CpG island 17125
Tssr54757 6 4600658 to 4600676 18 + TSS region transcription start site region 54757
Tssr54758 6 4600732 to 4600770 38 + TSS region transcription start site region 54758
Casd1 6 4600839 to 4643355 42516 + protein coding gene CAS1 domain containing 1
Tssr54759 6 4600898 to 4600956 58 + TSS region transcription start site region 54759
Tssr54760 6 4601124 to 4601164 40 + TSS region transcription start site region 54760
Gm44432 6 4610234 to 4611171 937 + unclassified gene predicted gene, 44432
Tssr54761 6 4623902 to 4623916 14 + TSS region transcription start site region 54761
Tssr54762 6 4623955 to 4623973 18 + TSS region transcription start site region 54762
Gm38761 6 4654215 to 4661370 7155 + lncRNA gene predicted gene, 38761
Sgce 6 4674350 to 4747204 72854 - protein coding gene sarcoglycan, epsilon