Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:4510879-4631728

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col1a2 6 4505618 to 4541543 35925 + protein coding gene collagen, type I, alpha 2
Tssr54721 6 4516391 to 4516413 22 + TSS region transcription start site region 54721
Tssr54722 6 4521387 to 4521423 36 + TSS region transcription start site region 54722
Tssr54723 6 4528371 to 4528385 14 + TSS region transcription start site region 54723
Tssr54724 6 4530952 to 4530966 14 + TSS region transcription start site region 54724
Tssr59717 6 4531272 to 4531294 22 - TSS region transcription start site region 59717
Tssr54725 6 4533737 to 4533768 31 + TSS region transcription start site region 54725
Tssr54726 6 4537773 to 4537798 25 + TSS region transcription start site region 54726
Tssr54727 6 4537845 to 4537879 34 + TSS region transcription start site region 54727
Tssr54728 6 4537944 to 4537956 12 + TSS region transcription start site region 54728
Tssr1769 6 4537971 to 4537980 9 + TSS region transcription start site region 1769
Tssr54729 6 4537990 to 4538010 20 + TSS region transcription start site region 54729
Tssr54730 6 4538616 to 4538645 29 + TSS region transcription start site region 54730
Tssr1770 6 4538655 to 4538668 13 + TSS region transcription start site region 1770
Tssr54731 6 4538671 to 4538690 19 + TSS region transcription start site region 54731
Tssr54732 6 4538691 to 4538777 86 + TSS region transcription start site region 54732
Tssr54733 6 4539467 to 4539474 7 + TSS region transcription start site region 54733
Tssr54734 6 4539478 to 4539491 13 + TSS region transcription start site region 54734
Tssr54735 6 4539492 to 4539502 10 + TSS region transcription start site region 54735
Tssr54736 6 4539516 to 4539528 12 + TSS region transcription start site region 54736
Tssr54737 6 4539538 to 4539545 7 + TSS region transcription start site region 54737
Tssr54738 6 4539576 to 4539588 12 + TSS region transcription start site region 54738
Tssr54739 6 4539591 to 4539600 9 + TSS region transcription start site region 54739
Tssr54740 6 4539655 to 4539677 22 + TSS region transcription start site region 54740
Tssr54741 6 4540006 to 4540016 10 + TSS region transcription start site region 54741
Tssr54742 6 4540528 to 4540542 14 + TSS region transcription start site region 54742
Tssr54743 6 4540543 to 4540573 30 + TSS region transcription start site region 54743
Tssr54744 6 4540574 to 4540585 11 + TSS region transcription start site region 54744
Tssr54745 6 4540586 to 4540591 5 + TSS region transcription start site region 54745
Tssr54746 6 4540599 to 4540620 21 + TSS region transcription start site region 54746
Tssr54747 6 4540630 to 4540671 41 + TSS region transcription start site region 54747
Tssr54748 6 4540674 to 4540679 5 + TSS region transcription start site region 54748
Tssr59718 6 4540721 to 4540735 14 - TSS region transcription start site region 59718
Tssr59719 6 4540789 to 4540832 43 - TSS region transcription start site region 59719
Tssr54749 6 4540843 to 4540852 9 + TSS region transcription start site region 54749
Tssr54750 6 4540856 to 4540861 5 + TSS region transcription start site region 54750
Tssr54751 6 4540864 to 4540875 11 + TSS region transcription start site region 54751
Tssr54752 6 4540907 to 4540922 15 + TSS region transcription start site region 54752
Tssr54753 6 4540929 to 4540946 17 + TSS region transcription start site region 54753
Tssr54754 6 4541038 to 4541055 17 + TSS region transcription start site region 54754
Tssr54755 6 4541437 to 4541448 11 + TSS region transcription start site region 54755
Gm18289 6 4570879 to 4571728 849 - pseudogene predicted gene, 18289
Gm33959 6 4584345 to 4587092 2747 - lncRNA gene predicted gene, 33959
Gm26696 6 4593804 to 4596651 2847 - lincRNA gene predicted gene, 26696
Tssr54756 6 4600334 to 4600355 21 + TSS region transcription start site region 54756
Cpgi17125 6 4600451 to 4601782 1331 CpG island CpG island 17125
Tssr54757 6 4600658 to 4600676 18 + TSS region transcription start site region 54757
Tssr54758 6 4600732 to 4600770 38 + TSS region transcription start site region 54758
Casd1 6 4600839 to 4643355 42516 + protein coding gene CAS1 domain containing 1
Tssr54759 6 4600898 to 4600956 58 + TSS region transcription start site region 54759
Tssr54760 6 4601124 to 4601164 40 + TSS region transcription start site region 54760
Gm44432 6 4610234 to 4611171 937 + unclassified gene predicted gene, 44432
Tssr54761 6 4623902 to 4623916 14 + TSS region transcription start site region 54761
Tssr54762 6 4623955 to 4623973 18 + TSS region transcription start site region 54762