MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:43480402-43880404

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tpk1	6	43345001 to 43666278	321277	-	protein coding gene	thiamine pyrophosphokinase
Tssr56057	6	43598214 to 43598220	6	+	TSS region	transcription start site region 56057
D6Mit350	6	43624574 to 43624746	172		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 350
Cpgi17344	6	43665619 to 43666479	860		CpG island	CpG island 17344
Tssr60680	6	43666134 to 43666145	11	-	TSS region	transcription start site region 60680
Tssr60681	6	43666158 to 43666224	66	-	TSS region	transcription start site region 60681
Gm46984	6	43678806 to 43679721	915	-	lncRNA gene	predicted gene, 46984
Tssr60682	6	43678977 to 43678978	1	-	TSS region	transcription start site region 60682
Tssr1827	6	43680402 to 43680404	2	+	TSS region	transcription start site region 1827
D6Mit76	6	43728877 to 43728991	114		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 76
Gm5990	6	43766565 to 43767310	745	-	pseudogene	predicted gene 5990
Pwbwq12	6	43826813 to 77811523	33984710		QTL	post-weaning body weight QTL 12
Pwgrq16	6	43826813 to 77811523	33984710		QTL	post-weaning growth rate QTL 16
Pwbwq10	6	43826813 to 77811523	33984710		QTL	post-weaning body weight QTL 10
Pwgrq5	6	43826813 to 77811523	33984710		QTL	pre-weaning growth rate QTL 5
Pwbwq11	6	43826813 to 77811523	33984710		QTL	post-weaning body weight QTL 11
Ogrq3	6	43826813 to 77811523	33984710		QTL	overall growth rate QTL 3
Gm35163	6	43839255 to 43852378	13123	+	lncRNA gene	predicted gene, 35163
Gm7783	6	43856124 to 43856904	780	-	pseudogene	predicted gene 7783