Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:42368067-42709020

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epha1 6 42358487 to 42373268 14781 - protein coding gene Eph receptor A1
2010310C07Rik 6 42370671 to 42380558 9887 + antisense lncRNA gene RIKEN cDNA 2010310C07 gene
Cpgi17338 6 42372858 to 42373284 426 CpG island CpG island 17338
Tssr60618 6 42373238 to 42373253 15 - TSS region transcription start site region 60618
Tssr60619 6 42373254 to 42373274 20 - TSS region transcription start site region 60619
Tssr56044 6 42397325 to 42397335 10 + TSS region transcription start site region 56044
Tssr1823 6 42397363 to 42397368 5 + TSS region transcription start site region 1823
Tas2r143 6 42400238 to 42401119 881 + protein coding gene taste receptor, type 2, member 143
Tas2r135 6 42405529 to 42406494 965 + protein coding gene taste receptor, type 2, member 135
Tssr56045 6 42416986 to 42416989 3 + TSS region transcription start site region 56045
Tas2r126 6 42434535 to 42435461 926 + protein coding gene taste receptor, type 2, member 126
Gm44470 6 42443790 to 42443931 141 - pseudogene predicted gene, 44470
Gm34818 6 42445242 to 42445912 670 - pseudogene predicted gene, 34818
Olfr458 6 42460076 to 42461017 941 - protein coding gene olfactory receptor 458
Olfr457 6 42471235 to 42472176 941 - protein coding gene olfactory receptor 457
Olfr456 6 42486163 to 42487214 1051 - protein coding gene olfactory receptor 456
Gm34752 6 42509630 to 42521467 11837 + lncRNA gene predicted gene, 34752
Gm4877 6 42519516 to 42520313 797 - pseudogene predicted gene 4877
Olfr455 6 42538067 to 42539020 953 - protein coding gene olfactory receptor 455
Cpgi17339 6 42538447 to 42538632 185 CpG island CpG island 17339
Gm38798 6 42578231 to 42581779 3548 - lncRNA gene predicted gene, 38798
Tssr56046 6 42585217 to 42585226 9 + TSS region transcription start site region 56046
Tssr56047 6 42585350 to 42585375 25 + TSS region transcription start site region 56047
Tssr60620 6 42585740 to 42585753 13 - TSS region transcription start site region 60620
Tssr60621 6 42585758 to 42585773 15 - TSS region transcription start site region 60621
Tssr60622 6 42585804 to 42585832 28 - TSS region transcription start site region 60622
Tssr60623 6 42585860 to 42585881 21 - TSS region transcription start site region 60623
Tssr60624 6 42585902 to 42585908 6 - TSS region transcription start site region 60624
Tssr56048 6 42585960 to 42585971 11 + TSS region transcription start site region 56048
Tssr60625 6 42585970 to 42585981 11 - TSS region transcription start site region 60625
Tssr60626 6 42585985 to 42585997 12 - TSS region transcription start site region 60626
Tssr60627 6 42586001 to 42586006 5 - TSS region transcription start site region 60627
Tssr56049 6 42586010 to 42586045 35 + TSS region transcription start site region 56049
Tssr60628 6 42586145 to 42586172 27 - TSS region transcription start site region 60628
Tssr60629 6 42586200 to 42586212 12 - TSS region transcription start site region 60629
Tssr60630 6 42586269 to 42586280 11 - TSS region transcription start site region 60630
Tssr60631 6 42586313 to 42586322 9 - TSS region transcription start site region 60631
Tssr60632 6 42586365 to 42586368 3 - TSS region transcription start site region 60632
Tssr60633 6 42586391 to 42586398 7 - TSS region transcription start site region 60633
Tssr60634 6 42586404 to 42586407 3 - TSS region transcription start site region 60634
Tssr60635 6 42586470 to 42586479 9 - TSS region transcription start site region 60635
Tssr60636 6 42586575 to 42586578 3 - TSS region transcription start site region 60636
Tssr60637 6 42586831 to 42586842 11 - TSS region transcription start site region 60637
Tssr60638 6 42586871 to 42586885 14 - TSS region transcription start site region 60638
Tssr60639 6 42586922 to 42586937 15 - TSS region transcription start site region 60639
Tssr60640 6 42587177 to 42587183 6 - TSS region transcription start site region 60640
Tcaf3 6 42587213 to 42597372 10159 - protein coding gene TRPM8 channel-associated factor 3
Tssr60641 6 42589788 to 42589798 10 - TSS region transcription start site region 60641
Tssr60642 6 42589867 to 42589871 4 - TSS region transcription start site region 60642
Tssr60643 6 42590848 to 42590853 5 - TSS region transcription start site region 60643
Tssr60644 6 42591035 to 42591045 10 - TSS region transcription start site region 60644
Tssr60645 6 42591897 to 42591907 10 - TSS region transcription start site region 60645
Tssr60646 6 42591928 to 42591933 5 - TSS region transcription start site region 60646
Tssr60647 6 42592356 to 42592362 6 - TSS region transcription start site region 60647
Tssr60648 6 42593276 to 42593293 17 - TSS region transcription start site region 60648
Tssr1824 6 42593338 to 42593341 3 - TSS region transcription start site region 1824
Tssr60649 6 42593451 to 42593456 5 - TSS region transcription start site region 60649
Tssr60650 6 42593523 to 42593534 11 - TSS region transcription start site region 60650
Tssr60651 6 42593997 to 42594004 7 - TSS region transcription start site region 60651
Tssr60652 6 42594113 to 42594124 11 - TSS region transcription start site region 60652
Tssr60653 6 42597301 to 42597315 14 - TSS region transcription start site region 60653
Tssr60654 6 42597376 to 42597384 8 - TSS region transcription start site region 60654
Tssr60655 6 42597390 to 42597397 7 - TSS region transcription start site region 60655
Tssr60656 6 42597402 to 42597412 10 - TSS region transcription start site region 60656
Tssr1825 6 42597456 to 42597461 5 - TSS region transcription start site region 1825
Tssr1826 6 42597494 to 42597503 9 - TSS region transcription start site region 1826
Tssr60657 6 42597548 to 42597559 11 - TSS region transcription start site region 60657
Tssr60658 6 42597568 to 42597581 13 - TSS region transcription start site region 60658
Tssr60659 6 42597628 to 42597649 21 - TSS region transcription start site region 60659
Tssr60660 6 42597662 to 42597679 17 - TSS region transcription start site region 60660
Tssr60661 6 42597686 to 42597702 16 - TSS region transcription start site region 60661
Tssr60662 6 42597712 to 42597720 8 - TSS region transcription start site region 60662
Tssr60663 6 42597831 to 42597838 7 - TSS region transcription start site region 60663
Tssr60664 6 42598120 to 42598137 17 - TSS region transcription start site region 60664
Tssr60665 6 42598967 to 42598970 3 - TSS region transcription start site region 60665
Tssr60666 6 42601616 to 42601623 7 - TSS region transcription start site region 60666
Tssr60667 6 42601848 to 42601863 15 - TSS region transcription start site region 60667
Tcaf2 6 42623043 to 42645041 21998 - protein coding gene TRPM8 channel-associated factor 2
Tssr60668 6 42644920 to 42644924 4 - TSS region transcription start site region 60668
Tssr60669 6 42645028 to 42645073 45 - TSS region transcription start site region 60669
Tssr60670 6 42645079 to 42645097 18 - TSS region transcription start site region 60670
Tcaf1 6 42668002 to 42710088 42086 - protein coding gene TRPM8 channel-associated factor 1
Tssr60671 6 42669858 to 42669872 14 - TSS region transcription start site region 60671
Cpgi17340 6 42692482 to 42693164 682 CpG island CpG island 17340
Tssr60672 6 42693030 to 42693070 40 - TSS region transcription start site region 60672
Tssr60673 6 42693071 to 42693082 11 - TSS region transcription start site region 60673
Tssr60674 6 42693091 to 42693100 9 - TSS region transcription start site region 60674