Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:42267792-42350932

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Casp2 6 42264985 to 42282508 17523 + protein coding gene caspase 2
Gm25108 6 42275650 to 42275727 77 + snoRNA gene predicted gene, 25108
Tssr56006 6 42280845 to 42280848 3 + TSS region transcription start site region 56006
Tssr56007 6 42282215 to 42282218 3 + TSS region transcription start site region 56007
Tssr56008 6 42286660 to 42286671 11 + TSS region transcription start site region 56008
Tssr56009 6 42286676 to 42286687 11 + TSS region transcription start site region 56009
Clcn1 6 42286685 to 42315756 29071 + protein coding gene chloride channel, voltage-sensitive 1
Tssr56010 6 42286709 to 42286718 9 + TSS region transcription start site region 56010
Gm38797 6 42310146 to 42313025 2879 - lncRNA gene predicted gene, 38797
Fam131b 6 42315312 to 42324643 9331 - protein coding gene family with sequence similarity 131, member B
Tssr60603 6 42323328 to 42323339 11 - TSS region transcription start site region 60603
Tssr60604 6 42323349 to 42323370 21 - TSS region transcription start site region 60604
Cpgi17336 6 42323664 to 42325239 1575 CpG island CpG island 17336
Tssr60605 6 42324554 to 42324599 45 - TSS region transcription start site region 60605
Tssr60606 6 42324648 to 42324671 23 - TSS region transcription start site region 60606
Gm44284 6 42328713 to 42350862 22149 - antisense lncRNA gene predicted gene, 44284
Gm24611 6 42337677 to 42337783 106 - snRNA gene predicted gene, 24611
Tssr60607 6 42340232 to 42340239 7 - TSS region transcription start site region 60607
Cpgi17337 6 42349476 to 42350791 1315 CpG island CpG island 17337
Tssr56011 6 42349594 to 42349629 35 + TSS region transcription start site region 56011
Zyx 6 42349630 to 42360213 10583 + protein coding gene zyxin
Tssr56012 6 42349665 to 42349681 16 + TSS region transcription start site region 56012
Tssr60608 6 42349671 to 42349680 9 - TSS region transcription start site region 60608
Tssr60609 6 42349692 to 42349717 25 - TSS region transcription start site region 60609
Tssr56013 6 42349791 to 42349800 9 + TSS region transcription start site region 56013
Tssr56014 6 42349826 to 42349837 11 + TSS region transcription start site region 56014
Tssr56015 6 42350000 to 42350076 76 + TSS region transcription start site region 56015
Tssr56016 6 42350082 to 42350091 9 + TSS region transcription start site region 56016
Tssr56017 6 42350099 to 42350110 11 + TSS region transcription start site region 56017
Tssr56018 6 42350247 to 42350356 109 + TSS region transcription start site region 56018
Tssr60610 6 42350447 to 42350476 29 - TSS region transcription start site region 60610
Tssr56019 6 42350621 to 42350634 13 + TSS region transcription start site region 56019
Tssr56020 6 42350710 to 42350754 44 + TSS region transcription start site region 56020
Tssr56021 6 42350778 to 42350790 12 + TSS region transcription start site region 56021