Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:41600624-41656405

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38582	6	41558488 to 41603450	44962	+	lncRNA gene	predicted gene, 38582
Gm27549	6	41602244 to 41602305	61	-	snRNA gene	predicted gene, 27549
Cpgi17333	6	41604607 to 41605921	1314		CpG island	CpG island 17333
Tssr55974	6	41605024 to 41605033	9	+	TSS region	transcription start site region 55974
Tssr55975	6	41605148 to 41605175	27	+	TSS region	transcription start site region 55975
Ephb6	6	41605482 to 41620509	15027	+	protein coding gene	Eph receptor B6
Tssr55976	6	41605496 to 41605569	73	+	TSS region	transcription start site region 55976
Tssr55977	6	41605651 to 41605671	20	+	TSS region	transcription start site region 55977
Trpv6	6	41620624 to 41636405	15781	-	protein coding gene	transient receptor potential cation channel, subfamily V, member 6
Gm38795	6	41621779 to 41624061	2282	+	lncRNA gene	predicted gene, 38795
Tssr60584	6	41636310 to 41636313	3	-	TSS region	transcription start site region 60584
Tssr60585	6	41636337 to 41636365	28	-	TSS region	transcription start site region 60585
Tssr60586	6	41636372 to 41636384	12	-	TSS region	transcription start site region 60586
Tssr60587	6	41636389 to 41636409	20	-	TSS region	transcription start site region 60587
Tssr55978	6	41641718 to 41641733	15	+	TSS region	transcription start site region 55978
Gm34642	6	41641730 to 41658800	17070	+	lncRNA gene	predicted gene, 34642
Tssr55979	6	41641735 to 41641753	18	+	TSS region	transcription start site region 55979
Trpv5	6	41652173 to 41680769	28596	-	protein coding gene	transient receptor potential cation channel, subfamily V, member 5